Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3584 ATGGTGCTGATTAATGGGATGGAGCAGAACAACGTGATCGCGCCGTTCGTTATAAAGACATACCACATGGTGAACGATCCAAGCACCGATAAGCTCATAACTTGGGGCCCAGGCAACAACAGCTTCGTCGTCCTCGACCCCCTCGACTTCTCCCACTTCCTCCTCCCTGCCTTCTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGTTTTAGAAAGGTAGATCCGGATCGGTGGGAGTTCGCGAACGAGTGGTTCCTTCGTGGGCAGAAGCACTTGCTGAAGAACATCGTGAGGAGAAAGCATGCGACAAGAACCTCTTCTTGTTATTCGAATCCTCCATCGCATTTTCACAGCCATGGCGGGAAGCAGCATGTGGTGGTTGCAGAAGAGCTTGATGACGAGGCCATGATGATGGAGATAGCGAGGCTAAAGGAGGAGCAGAAGGCTTTGGACGAAGAGCTTCGGGGGATGAACAAGAGGTTGGAGACAACAGAAAAGCGACCCCAGCAAATGATGGCCTTCTTGTGCAAGGTCGTGGAGGATCCAGAAGTTCTCTCCCGGATCCTCCTCGAGAGGGAGACGAGGCAAATCACCGAGAAGAAGCGCCGCTGCATCACGGCGGCGACTTCCTCCTCATCCTCCTCAGGCTTCGCTGTCAAGAGGGAGCTCGAGGAGGGGGAGGAACCAACCGTGGTGGGGAATTTGATTTCTTCCTCTCCGGAGACCAGCTTCGAAATCGATAATAAATTTTGCCACGTGGCATCGCCGCCGCACGAGGCGGCGCCGGCGGCCGCGGTGTGGTGGGGACAGAGGCCTCGGATTGGTCACCAGCACCAAGGGTATAACGGGTATAGCAATAATAATAGTAATAATTATGGTAGTTATGATTGCGCCGCCGCTTCGATGCCATTGTCGGTGGTGTCTCCGGCGGCGGTGCCGCCGCAAATTGGAGGAGGGTATTTGGGAGGGTGTGAGGGTAATGGGAAGGGTAAGGGGCAAGTGAACATTTTTAGTGAAATGGCGGCGGAGAATAGTCCTCGGCCACCTTATCCGTTTTCACTGTTGGAAGGTGGCTTTTAA 1098 0.5392 MVLINGMEQNNVIAPFVIKTYHMVNDPSTDKLITWGPGNNSFVVLDPLDFSHFLLPAFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLKNIVRRKHATRTSSCYSNPPSHFHSHGGKQHVVVAEELDDEAMMMEIARLKEEQKALDEELRGMNKRLETTEKRPQQMMAFLCKVVEDPEVLSRILLERETRQITEKKRRCITAATSSSSSSGFAVKRELEEGEEPTVVGNLISSSPETSFEIDNKFCHVASPPHEAAPAAAVWWGQRPRIGHQHQGYNGYSNNNSNNYGSYDCAAASMPLSVVSPAAVPPQIGGGYLGGCEGNGKGKGQVNIFSEMAAENSPRPPYPFSLLEGGF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3584 365 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 359 IPR027725 -
Dod02g3584 365 SMART hsfneu3 12 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g3584 365 SUPERFAMILY "Winged helix" DNA-binding domain 13 105 IPR036390 -
Dod02g3584 365 PANTHER HEAT STRESS TRANSCRIPTION FACTOR C-1 14 359 - -
Dod02g3584 365 Coils Coil 139 173 - -
Dod02g3584 365 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g3584 365 PRINTS Heat shock factor (HSF) domain signature 54 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g3584 365 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g3584 365 Pfam HSF-type DNA-binding 16 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g3584 365 ProSitePatterns HSF-type DNA-binding domain signature. 55 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g3584 365 Gene3D - 8 106 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3584 Dod-Chr2 73650178 73652043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3584 12 218 HSF AT3G24520 60.190 5.61e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod02g3584 HSF_DNA-bind 1.7e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3584 K09419 - gmx:100794896 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3584 02 73650178 73652043 Dod02g3584 02 73650178 73652043 ECH