Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3558 ATGATGGACACAGACCCTCCTCCACCATCGAACAAGAGCTGCTGGAGCATCCACACCCGACCGGAAATAACGGCCAAGTATGAGGTTCTGGACCGTGTCGGGTCAGGCGCCTACGCCGACGTCTACCGCGGGCGGCGCCTCTCCGACGACTTAACGGTGGCTCTGAAGGAGGTCCACGACGGTCGATCGGCGTTCAGGGAAATCGAGGCCTTAAGGGTCCTTCAGGGATCCCAAAACGTTGTCGTCATGCACGACTTCTTCTGGCGCAACGAGGATGATGAGGACGCCGTGATCGTGCTCGAGTTCCTTAAGACTGATCTTGCTACCGTGATTGCAGAAGGTGGTTTGGGTGGTGGTGAGGTGAAGAGGTGGATGATGCAGGTGCTTAGTGGGGTGGACGCTTGCCATAGGAACATGATCGTGCATAGGGACTTGAAGCCTGGGAATTTCTTGCTTTCTGATGATGGGGTGCTCAAGTTGGCGGATTTTGGACAGGCAAGGATACTTATGGAGCCTGGATTTGATTCTGTGGAGGAGAACCCACCACCATATGAGGATTATGATGCTTCAACTCCTCCTGAGAGTTCACTCCAACATCCTCCTGAGTCTCTCCCTCAGGATCAGGGAAGTGTGAGCCATGAAGAATATTTCAGGGTCCTAGATGAGATGAAAAACAAGAGCATCGCATATGACACCGATAAGGACACAAACATCTATGATGGAAACACCTCTTGTCTCGCAACATGCACAACAAGTGACGTAGATGATGATCTCTTCAAGGCTTCATTCGCATACGAAGCCGAAGCGGATAGAAGGAATGAACTTTATTGTTGTCTCACATCATGTGTCGGAACTCGTTGGTATAGGGCTCCTGAACTGCTTTATGGATGCACAGACTACGGTCTAGATGTTGATCTATGGTCTCTTGGGTGTATCTTTGCGGAACTATTAACACTTAAGCCCTTGTTTCCTGGAACATCTGATATAGATCAACTCAGCAGAATCATCAGTGTTTTGGGAAACATTGATGAGGAGGCTTGGCCTGGTTGTTCCAAACTTCCTGATTATGCCACAATATCATCTGGTAAGGTGGAAGAGCCTATTGGTCTTGAAGCCTGCATGGAGAAGTGCTCACATGATGAAGTGTCTCTGGTTAAGAAACTGATTTGTTATGATCCAGCTAGGAGAGCCACAGCAATGGAGTTGCTTCATGACAAGTACTTCAGTGAGGAGCCTCTTCCTGTTCCTGTTTCTGAGCTGCGTGTTCCTTTGACCAGAAATGGACAAGGTGAAGACTGA 1299 0.4919 MMDTDPPPPSNKSCWSIHTRPEITAKYEVLDRVGSGAYADVYRGRRLSDDLTVALKEVHDGRSAFREIEALRVLQGSQNVVVMHDFFWRNEDDEDAVIVLEFLKTDLATVIAEGGLGGGEVKRWMMQVLSGVDACHRNMIVHRDLKPGNFLLSDDGVLKLADFGQARILMEPGFDSVEENPPPYEDYDASTPPESSLQHPPESLPQDQGSVSHEEYFRVLDEMKNKSIAYDTDKDTNIYDGNTSCLATCTTSDVDDDLFKASFAYEAEADRRNELYCCLTSCVGTRWYRAPELLYGCTDYGLDVDLWSLGCIFAELLTLKPLFPGTSDIDQLSRIISVLGNIDEEAWPGCSKLPDYATISSGKVEEPIGLEACMEKCSHDEVSLVKKLICYDPARRATAMELLHDKYFSEEPLPVPVSELRVPLTRNGQGED* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3558 432 ProSiteProfiles Protein kinase domain profile. 27 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3558 432 Gene3D Transferase(Phosphotransferase) domain 1 277 410 - -
Dod02g3558 432 MobiDBLite consensus disorder prediction 174 210 - -
Dod02g3558 432 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Dod02g3558 432 SMART serkin_6 27 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3558 432 Gene3D Transferase(Phosphotransferase) domain 1 18 203 - -
Dod02g3558 432 MobiDBLite consensus disorder prediction 191 210 - -
Dod02g3558 432 PANTHER CYCLIN-DEPENDENT KINASE 10 24 415 - -
Dod02g3558 432 SUPERFAMILY Protein kinase-like (PK-like) 13 419 IPR011009 -
Dod02g3558 432 PANTHER CELL DIVISION PROTEIN KINASE 24 415 - -
Dod02g3558 432 Pfam Protein kinase domain 27 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3558 432 Pfam Protein kinase domain 274 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3558 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3558 Dod-Chr2 73131547 73135424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3558 13 432 Core Cell Cycle Gene Families AT4G28980 60.899 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Dod02g3558 Pkinase 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3558 - - gmx:548056 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3558 02 73131547 73135424 Dod02g3558 02 73131547 73135424 ECH
Dod04g2988 04 53645695 53648245 Dod02g3558 02 73131547 73135424 PCT