Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3552 ATGAATAGAGGTGTTGCTCAAAGTCCACCGGTGCAGCAAATGATGGCCGGGAATCCTAACTGGTGGAACATCAATAGCATGAGGCCCCCTCCTCAACAAGCTCCTCCTTTCTTGTCCACTCATTCAAACTTTCTCACCCCACCATATTCTTCTTCTTCTTCTTCTCTTCCTTTCCCTTATTGGCATGAGAATCAAGAGATTCCTGAGTCATGGAGCCAACTACTCATGGGTGGACTGGTGGCAGAAGAAGATAAGGGTGGTATGGGCCTTTTTCAGAGCAAGAAGTTAGAGAACTGGGAGGATCATCAAATGCTACGTCAGGCTCCAAATGCTTCTCTTGTTGATGTCAAACAAGAAAGCTCGGTTAACAGCTATGTATATGGGCATGGAAATGAAGAACTTCAGCCATCAAAGCCTGCAGCTTGGTCACCAAACTCCTGTGTCACAAGCTTCAGCAGCAACATGCTGGATTTCTCTAACAATAAGACGGATGCAAGGCATCCTCCACCAGATCGATCCTCTGAGTGCAACAGCTCTGCAGCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAGCCCTCCACAACAACTCAATCTACCTTCAAGGTCAGAAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCTGTCTTGTTAGAAGCTATTGGGTATATTAGATTCCTTCAGAGTCAAATTGAGGCTCTTAGCTTACCATACTTTAGCAGTGGATCAGGAAATTCGAGGCACCAACATTCTGCTCAGGGAGAGAAGAATTGTATATTCCCTGAAGACCCCGGTCAGCTACTGAATGAAAACTGCTTGAAGAGGAAAGCAGCTGGTGAGCAGGATTCTCAAGAGGAACCTAAGAAGGACCTGAGGAGTAGAGGGTTGTGTTTGGTTCCAGTGTCATGCACACTGCAAGTTGGGAGTGACAATGGAGCTGACTATTGGGCTCCTGCCCTTGGAGGGGGCTTTCGGTAG 1017 0.4749 MNRGVAQSPPVQQMMAGNPNWWNINSMRPPPQQAPPFLSTHSNFLTPPYSSSSSSLPFPYWHENQEIPESWSQLLMGGLVAEEDKGGMGLFQSKKLENWEDHQMLRQAPNASLVDVKQESSVNSYVYGHGNEELQPSKPAAWSPNSCVTSFSSNMLDFSNNKTDARHPPPDRSSECNSSAAGGALKKARVQPSTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYFSSGSGNSRHQHSAQGEKNCIFPEDPGQLLNENCLKRKAAGEQDSQEEPKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3552 338 Gene3D - 196 250 IPR036638 GO:0046983
Dod02g3552 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 252 IPR036638 GO:0046983
Dod02g3552 338 PANTHER OS05G0228400 PROTEIN 16 324 - -
Dod02g3552 338 CDD bHLH_AtbHLH_like 199 248 IPR045239 -
Dod02g3552 338 MobiDBLite consensus disorder prediction 158 198 - -
Dod02g3552 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 191 240 IPR011598 GO:0046983
Dod02g3552 338 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3552 Dod-Chr2 73065349 73069966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3552 1 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.326 1.34e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3552 - - gmx:100786555 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3552 02 73065349 73069966 Dod02g3552 02 73065349 73069966 ECH
Dod04g2984 04 53623255 53626494 Dod02g3552 02 73065349 73069966 PCT