Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3551 ATGTCTGTGCCATTAGAGCAAGGCTATGTAGGCTTACCTGATGCTCCTTCAATGGAAAGCACTGAAAAGTTTTCTCAGAGGGCAAGCAGTGGCTTGAACCTCAAGGCTACTGAGCTTAGGCTTGGTTTGCCTGGTTCTGAGTCACCAGAGAGGGAAGGTGTTGGTGTTGGTGTTGGTGTTGAGGACAAGAATGTGTACTCATTAGGGGTGTTGAAGAGTTTGGTGTCAGGGGCCAAAAGGGGTTTCTCTGATGCCATTGATGGTGGTTCTGGGAAGTGGATTCTCTCTGGGAAAAATGGATCTGAGGTTGGTATTGGTAAAGATGGTGGCTTGTTCTCTCCAAGGGGTGTTGGTGCTGGTAAGGCTCTTGCAGTCCCTGACTGCACTAATCGGCAAGCATCTGTTGTCAAAGAGAAGATTCCTCAGTCTCCAAAGCCAGTGAATGAGAAGATATCTGCGCCTGCTGCTAAGGAACAGGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGGCTACTCAGCCTCAAAAGAATGATGCTGATGCAGAAGCCAAGTCTGGCTGCCTTTATGTGAAAGTCAGCATGGATGGCGCTCCATACTTGAGGAAAGTGGATCTCAAACACTTTGCCACTTACAGGGAACTATCTTCAGCACTGGAAAAGATGTTTAGTTGTTTTACAATCAGTCAATGTGGCTCTCATGGAGTTTCTGGCCATGATAATTTGAGTGAAAGTAGATTGATGGATCTCCTTCATGGTTCAGAATATGTGCTCACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCATGGGAGATGTTCACTAACTCTTGCAAGAGGATGAGGATAATGAAGAGTTCTGAAGCAATTGGACTAGGTAGGGCTACCAATATTATATCCCTGCTTCTTATCCATAAAAGAAAAACCTAA 951 0.4553 MSVPLEQGYVGLPDAPSMESTEKFSQRASSGLNLKATELRLGLPGSESPEREGVGVGVGVEDKNVYSLGVLKSLVSGAKRGFSDAIDGGSGKWILSGKNGSEVGIGKDGGLFSPRGVGAGKALAVPDCTNRQASVVKEKIPQSPKPVNEKISAPAAKEQVVGWPPIRSFRKNSMATQPQKNDADAEAKSGCLYVKVSMDGAPYLRKVDLKHFATYRELSSALEKMFSCFTISQCGSHGVSGHDNLSESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTNSCKRMRIMKSSEAIGLGRATNIISLLLIHKRKT* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3551 316 MobiDBLite consensus disorder prediction 1 31 - -
Dod02g3551 316 ProSiteProfiles PB1 domain profile. 191 293 IPR000270 GO:0005515
Dod02g3551 316 PANTHER AUXIN-RESPONSIVE PROTEIN 15 304 - -
Dod02g3551 316 Pfam AUX/IAA family 37 300 IPR033389 -
Dod02g3551 316 Gene3D - 185 305 - -
Dod02g3551 316 SUPERFAMILY CAD & PB1 domains 188 292 - -
Dod02g3551 316 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 15 304 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3551 Dod-Chr2 73004941 73007471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3551 165 295 B3 DNA Binding Superfamily AT1G34170 28.676 4.82e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dod02g3551 AUX_IAA 2.5e-87 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3551 K14484 - gmx:100803754 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3551 02 73004941 73007471 Dod02g3551 02 73004941 73007471 ECH
Dod04g2982 04 53565500 53568940 Dod02g3551 02 73004941 73007471 PCT