Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3541 ATGGAATGCATCATCGCCGGCAAGTACAAGATCGGCCGCAAGATCGGAAGCGGATCCTTCGGCGAAATCTACCTCGCCTCGCATGTCCACACCTTTGAGACCGTCGCCGTCAAGATTGAGAATGGTAAAACGAAGCATCCACAATTACTTTATGAGGCCAAGCTTTACCATATTCTCCGAGGAGGAAGTGGCATTCCTGCTATAAGATGGGCTGGTGCATATGGGGAGGACAATGCACTTGTTATGGATTTGCTGGGGCCTAGTCTTGAGGATCTCTTTGTCTACTGTGGAAGGAAGTTCTCTTTGAAGACAGTGTTGATGTTGGCTGATCAATTGATGACTAGAATAGAATATGTGCACTCTAAAGGATTTCTACACAGGGATATCAAGCCTGATAACTTTCTCATGGGAATTGGTCGGAAAGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCTGCAACCAATCGCCACATCCCTTACAGGGAGAACAAAAGCTTAACAGGGACTGCACGCTATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGCCGGCGGGATGATTTGGAGTCATTAGGGTATGTACTTCTGTACTTCCTCAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACGAAAAAGCAGAAGTATGACAAAATATGTGAGAAGAAAGTATCAACTCCTATTGAGGTATTATGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCTCTGACCTTTGATCAGAGACCTGATTATGGATTCTTGAAGCGCCTATTTCGGGAACTATTTGGTCGGGAAGGTTATGAATTTGATTATGTGTTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTTCAGCCTCAGACATCTCTGGTCCCTGGAGCAAGCAACAGTCGTGCAATGCCAATGGATGTTGACAACCATCGAGGTGATGCTACAGAGCGCATTAAATCAGGAAATGCTGCTGGCTCTGGTGTTAAAATTCAGTTCAAATCACCCGCAGTTAAAAATTTGAGTTCTGAAAATCTTCTTGAAAAGAATATTTTTGGGGAAGCGAATGTACCCTCTACTTCTTATGCGCTTGCTGGTACCTCAAAAAGGAACTCCTTGAAGCCTGCTATGTCCTCTGAAGCTGCCAACCCTGGGCATGGGCAAGGCAGTAAAGTTGGCCCTTCAAGTAGCTGGATTTCATCTCTGAACCGCATATCTTCTGCCAAATGA 1275 0.4455 MECIIAGKYKIGRKIGSGSFGEIYLASHVHTFETVAVKIENGKTKHPQLLYEAKLYHILRGGSGIPAIRWAGAYGEDNALVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQLMTRIEYVHSKGFLHRDIKPDNFLMGIGRKANQVYIIDFGLAKRYRDSATNRHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRELFGREGYEFDYVFDWTILKYQQAQKNRVQPQTSLVPGASNSRAMPMDVDNHRGDATERIKSGNAAGSGVKIQFKSPAVKNLSSENLLEKNIFGEANVPSTSYALAGTSKRNSLKPAMSSEAANPGHGQGSKVGPSSSWISSLNRISSAK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3541 424 MobiDBLite consensus disorder prediction 387 424 - -
Dod02g3541 424 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Dod02g3541 424 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3541 424 MobiDBLite consensus disorder prediction 303 336 - -
Dod02g3541 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dod02g3541 424 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3541 424 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Dod02g3541 424 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Dod02g3541 424 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3541 424 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3 1 408 - -
Dod02g3541 424 PANTHER CASEIN KINASE-RELATED 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3541 Dod-Chr2 72776269 72785485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3541 4 213 Miscellaneous Gene Families AT3G23000 31.050 4.98e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dod02g3541 Pkinase 5.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3541 K08960 - gmx:100805890 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3541 02 72776269 72785485 Dod02g3541 02 72776269 72785485 ECH
Dod04g2974 04 53519304 53524981 Dod02g3541 02 72776269 72785485 PCT