Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3532 ATGGGTAGTAGTAGCGAACCACAAACACCAACCTCGGAAACAGACACATCAGCAAGAAGCACCACCACCGCCAACTCCACCGCTTCACCACCATCAACCCCAACCTCAAAACAACAACACAACCCACCCAACAACAAAAAGCGACCAAGACAAAACAACGTTAAGAGCAACAACAACAGCAGCAGCAGCAGCAAGCACCCGGTATACAGAGGGGTCAGAATGCGCACGTGGGGGAAATGGGTGTCCGAAATCCGTGAGCCACGCAAGAAAAGCCGCATCTGGCTCGGCACCTTCGCCACGCCCGAGATGGCGGCGCGTGCACACGACGCGGCAGCTCTCACCATAAAGGGCTCATCCGCCATCCTCAACTTCCCCGAACTCGCCGCCTCCCTTCCCCGGCCGGAATCAAACTCCCCACGCCATGTACAGGCCGCCGCAGCCAAAGCCGCCGCAATGAACCCTCCTCCTCCGGCGGCGCCGCCGTGCTCATCTTCCTCCGACGAGGCATCGACGCCGGAGGAGGAGCTGGGGGAAATAGTGCAGCTTCCGCCGCTTGGGACGAGTTTCGAAATACCCGATTACCCGAATAGCGATGAGTTCGTGTTCTCCGACCATGTTGATGGTGGTGGGTGGCCCTATGGTCACCCATGGTATCAAGGAATTTATGATGATGAGAATGATTATTGTTATAGCTTTGGGGAACTGAATAATAATGGTTTGATGATGAATATGATGATTCCAATGCTGCATGATGAATCTGATGAGACTTTGGTTCCTTCTTCTCTTTGGCAATAG 795 0.5434 MGSSSEPQTPTSETDTSARSTTTANSTASPPSTPTSKQQHNPPNNKKRPRQNNVKSNNNSSSSSKHPVYRGVRMRTWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDAAALTIKGSSAILNFPELAASLPRPESNSPRHVQAAAAKAAAMNPPPPAAPPCSSSSDEASTPEEELGEIVQLPPLGTSFEIPDYPNSDEFVFSDHVDGGGWPYGHPWYQGIYDDENDYCYSFGELNNNGLMMNMMIPMLHDESDETLVPSSLWQ* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3532 264 MobiDBLite consensus disorder prediction 1 67 - -
Dod02g3532 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 230 - -
Dod02g3532 264 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 19 230 - -
Dod02g3532 264 SMART rav1_2 68 131 IPR001471 GO:0003700|GO:0006355
Dod02g3532 264 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
Dod02g3532 264 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Dod02g3532 264 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Dod02g3532 264 SUPERFAMILY DNA-binding domain 68 126 IPR016177 GO:0003677
Dod02g3532 264 MobiDBLite consensus disorder prediction 1 70 - -
Dod02g3532 264 MobiDBLite consensus disorder prediction 146 175 - -
Dod02g3532 264 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Dod02g3532 264 CDD AP2 69 127 IPR001471 GO:0003700|GO:0006355
Dod02g3532 264 ProSiteProfiles AP2/ERF domain profile. 68 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3532 Dod-Chr2 72646746 72648325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3532 55 244 AP2-EREBP Transcription Factor Family AT5G11590 53.171 3.22e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod02g3532 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3532 K09286 - gmx:100784134 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2963 04 53425340 53427054 Dod02g3532 02 72646746 72648325 PCT