Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod02g3515 | ATGCCTTCCCAAAAGAAGGATGAGTTACACAAGGGAGAGACGGTGATGAGTGAAAAAGAGAGAGCTTCTTCCATAGGCATAATCTTGAGATATGCTGATTGGGTTGATGTTATGCTTATGTTAATGGGTGCTTTTGGAGCAATAGGAGATGGCATGTCCACAAACATTTTGCTCCTCTTTGCTAGCCGCATCATGAACAGCTTAGGATTTGGCTACAACAACAACAACCAACAAAGTAGTGTCAATTACATGGCTGAGGTTGAAAAGTGCAGCTTATATTTTGTCTACTTGGGATTAGCAGTTATGGTTGTGGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAAGTGAGAGGCAGGTGCTGAGAATTCGCTACAAGTATTTGGAAGCTGTACTCAGACAAGAAGTGGGGTTTTTTGATTCACAAGAAGCAACCACTTCTGAAGTCACCAGTAGCATATCAAAGGACACTTCTCTCATCCAAGAAGTTCTAAGTGAGAAGGTTCCCCTATTTTTAATGCATTCATCATCATTCATCTCTGGGGTTGCTTTTGCCACGTACTTCTCTTGGAGGTTGGCTTTAGTAGCATTCCCAACACTTCTTTTACTCATCATCCCTGGCATGATCTATGGGAAATACCTCATCTACTTGTCAAAGTTGTCCATCAAGGAGTACGGCAAAGCAAACTCCATTGTGGAGCAGGCACTGAGCTCCATCAAAACAATTTATTCATTCACTGCTGAGAGGAGAATCATGGGGAGATACTCAGACATATTAGACAGAACTTCAAGGCTTGGAATCAAGCAAGGCATAGCAAAGGGTCTTGCTGTGGGAAGCACAGGCCTCTCTTTTGCAATATGGGCTTTTCTTGCTTGGTATGGAAGCCATTTGGTAATGTACAAAGGAGAAAGCGGTGGGAGGATCTATGCAGCAGGCATTTGCTTCATAATGAGTGGACTATCCCTTGGAGTGGTACTTCCTGATTTGAAGTACTTCACTGAAGCATCAGTTGCTGCATCAAGAATATTTGATATGATTGGCCGAACACCAGCAATTGATGGTGAAGACACAAAAGGGGTTGTGTTAGAGCGCATTAATGGCAAGCTAGACTTTGATCATGTGAAATTCACATACCCTTCTAGGCCAGATATGGTTGTGCTTAATGACTTCAATCTCCAAGTTGAGGCAGGAAAAACTGTGGCTCTTGTTGGAGCAAGTGGAAGTGGAAAGTCCACTGCAATAGCTTTGGTGCAAAGGTTCTATGATGTGGATGAAGGTGTTGTGAGGGTTGATGGTGTGGACATAAAAAGCCTTCACCTGAAATGGATAAGAGGGAAGATGGGACTTGTGAGTCAAGAACATGCACTCTTTGGGACATCTATAAAGGAGAATATTATGTTTGGGAAGCCTGATGCTACCATGGATGAAGTTGTTGCTGCTGCCACTGCAGCCAATGCTCATAACTTCATTAGGCAGCTTCCTGAAGGTTATGAAACCAAGATTGGAGAAAGGGGGGCCCTGCTTTCAGGAGGACAAAAGCAGCGAATAGCCATTGCAAGAGCCATCATAAAGAATCCAGTAATTCTCCTACTTGATGAAGCAACCAGTGCCCTCGACTCTGAATCAGAATTACTGGTCCAGAATGCCCTTGATCAAGCCTCCATGGGGAGGACTACATTGGTTGTTGCCCACAAGCTATCAACCATTCGCAATGCAGACCTCATAGCAGTTGTTAGTGGTGGTTGCATCATTGAAACTGGCACACACAATGAACTTATCAACTGTCCAAATGGCCTCTATGCAAAGCTGGCAAAGTTGCAGACACAATTCAGCTTTGATGACCAAGATCAAAACCAAGAACTAGGTGTCCTCTCTGCAGCAAGAAGCAGTGCAGGTAGACCAAGCACTGCAAGGTCAAGCCCTGCCATCTTTCCAAAGTCACCATTGCTTGATGATGATACCACCACCACCCCATCATCTCTTGTGTCTCACCCTTCACCTTCTTTTCCAAGGCTTCTTTCTCTGAATGCTCCTGAATGGAAACAAGGTTTGATTGGAACCATCTCAGCTATAGCATTTGGCTCAGTTCAACCCATATATGCCTTAACCATTGGTGGCATGATTTCTGCATTTTTCGCTGAAAGCCATCAGGAAATGACTCATAGAATCAGGACTTATTCTTTGATTTTCTCTTCTCTCTCTTTGGCTTCCATCATCCTCAATCTATTGCAACACTACAATTTTGCTTATATGGGAGCCAAGTTAACAAAAAGGATAAGGTTGTGCATGCTGGAGAAGATCTTAACCTTTGAAACTGCTTGGTTTGATGAGGAACAGAACTCTAGTGGGGCATTATGCTCAAGGTTGAGCAATGAGGCTTCAATGGTCAAGTCCCTTGTTGCGGACCGAATCTCCTTGCTAGTTCAAACGGCTTCTGCAGTCACCATTGCAATGATCATAGGGCTTGCTGTGGCGTGGAAGCTTGCTCTTGTTATGATAGCAGTGCAGCCGCTCACAATCCTTTGCTTTTACACAAGAAAAGTTTTGCTGTCTACACTTTCAACCAAGTTTGTCAAGGCTCAGAATCAAAGCACACAAATTGCAGTGGAAGCAGTTTACAATCATAGGATTGTGACCTCATTTGGAAGCATCCCGAAAGTTCTACTGCTATTTGATAAGGCTCAAGAGGCACCAAGGAAGGAAGCAAGGAAGAAGGCTTGGCTAGCTGGCACTGGAATGGGTTCCGCCCAGTGCCTAACATTCATGTCTTGGGCTTTGGATTTCTGGTATGGTGGTACATTGGTGCAAAAGAGAGAGATATCAGCGGGGGATGTGTTCAAAACATTTTTTGTGTTGGTGAGCACTGGCAAGGTCATAGCTGAAGCTGGAAGCATGACTTCTGACCTTGCCAAGAGCTCAACAGCAGTGGCATCAGTGTTTGAAATTCTTGACAGGCACTCACTGATTCCCAAGGCTGGAGATTATGGAACCAAGTTGGAAAAGATGAGTGGGAAGATAGAGTTGAAGAATGTCGATTTTGCCTATCCAAGCAGGGCAGGGACCCCAATACTGCGCAGGTTTTGCTTGGAGGTGAAGCCAGGGAAAAGTATTGGCCTTGTTGGGAAAAGTGGGTGTGGAAAATCAACAGTGATTGCTTTGATTCAGAGATTCTATGATGTTGAGAGAGGGTATGTCAAAGTGGACAATGTGGACATAAGGGAATTGGACATTCAATGGTATAGGCAGCACACAGCACTTGTTAGCCAAGAACCTGTTATATATTCTGGCAGCATACGTGACAACATTTTGTTTGGGAAGCAAGATGCATCAGAGAATGAAGTGATTGAAGCTGCAAGAGCTGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACTGAATGTGGAGAGAGGGGAGTACAGTTATCAGGAGGACAAAAGCAAAGAATAGCAATTGCAAGGGCCATAATTCGGAACCCAACAATATTGTTGCTAGATGAGGCAACAAGTGCATTGGACGTGCAATCAGAACAAGTTGTGCAAGAAGCACTTGATAGGATCATGGTAGGAAGAACTACCATTGTGGTGGCACATAGGCTTAACACCATCAAGGAGCTTGACTCAATTGCCTATGTGTCAGAGGGCAAGGTTCTTGAGCAAGGAACCTATGCTCAGCTTAGGCACATGAGAGGTGCATTCTTCAACCTTGCTAGCCATCAAATGCAAACTTAG | 3741 | 0.4416 | MPSQKKDELHKGETVMSEKERASSIGIILRYADWVDVMLMLMGAFGAIGDGMSTNILLLFASRIMNSLGFGYNNNNQQSSVNYMAEVEKCSLYFVYLGLAVMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQEATTSEVTSSISKDTSLIQEVLSEKVPLFLMHSSSFISGVAFATYFSWRLALVAFPTLLLLIIPGMIYGKYLIYLSKLSIKEYGKANSIVEQALSSIKTIYSFTAERRIMGRYSDILDRTSRLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGRIYAAGICFIMSGLSLGVVLPDLKYFTEASVAASRIFDMIGRTPAIDGEDTKGVVLERINGKLDFDHVKFTYPSRPDMVVLNDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDVDEGVVRVDGVDIKSLHLKWIRGKMGLVSQEHALFGTSIKENIMFGKPDATMDEVVAAATAANAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVSGGCIIETGTHNELINCPNGLYAKLAKLQTQFSFDDQDQNQELGVLSAARSSAGRPSTARSSPAIFPKSPLLDDDTTTTPSSLVSHPSPSFPRLLSLNAPEWKQGLIGTISAIAFGSVQPIYALTIGGMISAFFAESHQEMTHRIRTYSLIFSSLSLASIILNLLQHYNFAYMGAKLTKRIRLCMLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRISLLVQTASAVTIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFVKAQNQSTQIAVEAVYNHRIVTSFGSIPKVLLLFDKAQEAPRKEARKKAWLAGTGMGSAQCLTFMSWALDFWYGGTLVQKREISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVASVFEILDRHSLIPKAGDYGTKLEKMSGKIELKNVDFAYPSRAGTPILRRFCLEVKPGKSIGLVGKSGCGKSTVIALIQRFYDVERGYVKVDNVDIRELDIQWYRQHTALVSQEPVIYSGSIRDNILFGKQDASENEVIEAARAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHMRGAFFNLASHQMQT* | 1247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod02g3515 | 1246 | Gene3D | - | 367 | 630 | IPR027417 | - | |
Dod02g3515 | 1246 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 8-RELATED | 24 | 1243 | - | - | |
Dod02g3515 | 1246 | CDD | ABC_MTABC3_MDL1_MDL2 | 1006 | 1243 | - | - | |
Dod02g3515 | 1246 | Gene3D | ABC transporter type 1, transmembrane domain | 92 | 925 | IPR036640 | GO:0005524|GO:0016021 | |
Dod02g3515 | 1246 | Pfam | ABC transporter | 387 | 536 | IPR003439 | GO:0005524 | |
Dod02g3515 | 1246 | Gene3D | - | 996 | 1246 | IPR027417 | - | |
Dod02g3515 | 1246 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1006 | 1242 | IPR003439 | GO:0005524 | |
Dod02g3515 | 1246 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 40 | 342 | - | - | |
Dod02g3515 | 1246 | MobiDBLite | consensus disorder prediction | 626 | 642 | - | - | |
Dod02g3515 | 1246 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 673 | 989 | - | - | |
Dod02g3515 | 1246 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 359 | 607 | IPR027417 | - | |
Dod02g3515 | 1246 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 369 | 605 | IPR003439 | GO:0005524 | |
Dod02g3515 | 1246 | SUPERFAMILY | ABC transporter transmembrane region | 28 | 353 | IPR036640 | GO:0005524|GO:0016021 | |
Dod02g3515 | 1246 | Pfam | ABC transporter | 1027 | 1173 | IPR003439 | GO:0005524 | |
Dod02g3515 | 1246 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 24 | 1243 | IPR039421 | - | |
Dod02g3515 | 1246 | MobiDBLite | consensus disorder prediction | 650 | 665 | - | - | |
Dod02g3515 | 1246 | SUPERFAMILY | ABC transporter transmembrane region | 670 | 984 | IPR036640 | GO:0005524|GO:0016021 | |
Dod02g3515 | 1246 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 41 | 334 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g3515 | 1246 | MobiDBLite | consensus disorder prediction | 626 | 665 | - | - | |
Dod02g3515 | 1246 | Pfam | ABC transporter transmembrane region | 684 | 954 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g3515 | 1246 | Pfam | ABC transporter transmembrane region | 44 | 301 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g3515 | 1246 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 684 | 971 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Dod02g3515 | 1246 | ProSitePatterns | ABC transporters family signature. | 1145 | 1159 | IPR017871 | GO:0005524 | |
Dod02g3515 | 1246 | SMART | AAA_5 | 1033 | 1225 | IPR003593 | - | |
Dod02g3515 | 1246 | SMART | AAA_5 | 396 | 588 | IPR003593 | - | |
Dod02g3515 | 1246 | CDD | ABC_MTABC3_MDL1_MDL2 | 370 | 607 | - | - | |
Dod02g3515 | 1246 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 998 | 1244 | IPR027417 | - | |
Dod02g3515 | 1246 | ProSitePatterns | ABC transporters family signature. | 508 | 522 | IPR017871 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod02g3515 | Dod-Chr2 | 72320160 | 72329668 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod02g3515 | 15 | 1229 | Calmodulin-binding Proteins | AT2G36910 | 43.109 | 0.0 | 961 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod02g3515 | K05658 | - | gmx:100801088 | 2121.67 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g3515 | 02 | 72320160 | 72329668 | Dod02g3515 | 02 | 72320160 | 72329668 | ECH |