Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3515 ATGCCTTCCCAAAAGAAGGATGAGTTACACAAGGGAGAGACGGTGATGAGTGAAAAAGAGAGAGCTTCTTCCATAGGCATAATCTTGAGATATGCTGATTGGGTTGATGTTATGCTTATGTTAATGGGTGCTTTTGGAGCAATAGGAGATGGCATGTCCACAAACATTTTGCTCCTCTTTGCTAGCCGCATCATGAACAGCTTAGGATTTGGCTACAACAACAACAACCAACAAAGTAGTGTCAATTACATGGCTGAGGTTGAAAAGTGCAGCTTATATTTTGTCTACTTGGGATTAGCAGTTATGGTTGTGGCCTTCATGGAAGGGTATTGCTGGAGCAAAACAAGTGAGAGGCAGGTGCTGAGAATTCGCTACAAGTATTTGGAAGCTGTACTCAGACAAGAAGTGGGGTTTTTTGATTCACAAGAAGCAACCACTTCTGAAGTCACCAGTAGCATATCAAAGGACACTTCTCTCATCCAAGAAGTTCTAAGTGAGAAGGTTCCCCTATTTTTAATGCATTCATCATCATTCATCTCTGGGGTTGCTTTTGCCACGTACTTCTCTTGGAGGTTGGCTTTAGTAGCATTCCCAACACTTCTTTTACTCATCATCCCTGGCATGATCTATGGGAAATACCTCATCTACTTGTCAAAGTTGTCCATCAAGGAGTACGGCAAAGCAAACTCCATTGTGGAGCAGGCACTGAGCTCCATCAAAACAATTTATTCATTCACTGCTGAGAGGAGAATCATGGGGAGATACTCAGACATATTAGACAGAACTTCAAGGCTTGGAATCAAGCAAGGCATAGCAAAGGGTCTTGCTGTGGGAAGCACAGGCCTCTCTTTTGCAATATGGGCTTTTCTTGCTTGGTATGGAAGCCATTTGGTAATGTACAAAGGAGAAAGCGGTGGGAGGATCTATGCAGCAGGCATTTGCTTCATAATGAGTGGACTATCCCTTGGAGTGGTACTTCCTGATTTGAAGTACTTCACTGAAGCATCAGTTGCTGCATCAAGAATATTTGATATGATTGGCCGAACACCAGCAATTGATGGTGAAGACACAAAAGGGGTTGTGTTAGAGCGCATTAATGGCAAGCTAGACTTTGATCATGTGAAATTCACATACCCTTCTAGGCCAGATATGGTTGTGCTTAATGACTTCAATCTCCAAGTTGAGGCAGGAAAAACTGTGGCTCTTGTTGGAGCAAGTGGAAGTGGAAAGTCCACTGCAATAGCTTTGGTGCAAAGGTTCTATGATGTGGATGAAGGTGTTGTGAGGGTTGATGGTGTGGACATAAAAAGCCTTCACCTGAAATGGATAAGAGGGAAGATGGGACTTGTGAGTCAAGAACATGCACTCTTTGGGACATCTATAAAGGAGAATATTATGTTTGGGAAGCCTGATGCTACCATGGATGAAGTTGTTGCTGCTGCCACTGCAGCCAATGCTCATAACTTCATTAGGCAGCTTCCTGAAGGTTATGAAACCAAGATTGGAGAAAGGGGGGCCCTGCTTTCAGGAGGACAAAAGCAGCGAATAGCCATTGCAAGAGCCATCATAAAGAATCCAGTAATTCTCCTACTTGATGAAGCAACCAGTGCCCTCGACTCTGAATCAGAATTACTGGTCCAGAATGCCCTTGATCAAGCCTCCATGGGGAGGACTACATTGGTTGTTGCCCACAAGCTATCAACCATTCGCAATGCAGACCTCATAGCAGTTGTTAGTGGTGGTTGCATCATTGAAACTGGCACACACAATGAACTTATCAACTGTCCAAATGGCCTCTATGCAAAGCTGGCAAAGTTGCAGACACAATTCAGCTTTGATGACCAAGATCAAAACCAAGAACTAGGTGTCCTCTCTGCAGCAAGAAGCAGTGCAGGTAGACCAAGCACTGCAAGGTCAAGCCCTGCCATCTTTCCAAAGTCACCATTGCTTGATGATGATACCACCACCACCCCATCATCTCTTGTGTCTCACCCTTCACCTTCTTTTCCAAGGCTTCTTTCTCTGAATGCTCCTGAATGGAAACAAGGTTTGATTGGAACCATCTCAGCTATAGCATTTGGCTCAGTTCAACCCATATATGCCTTAACCATTGGTGGCATGATTTCTGCATTTTTCGCTGAAAGCCATCAGGAAATGACTCATAGAATCAGGACTTATTCTTTGATTTTCTCTTCTCTCTCTTTGGCTTCCATCATCCTCAATCTATTGCAACACTACAATTTTGCTTATATGGGAGCCAAGTTAACAAAAAGGATAAGGTTGTGCATGCTGGAGAAGATCTTAACCTTTGAAACTGCTTGGTTTGATGAGGAACAGAACTCTAGTGGGGCATTATGCTCAAGGTTGAGCAATGAGGCTTCAATGGTCAAGTCCCTTGTTGCGGACCGAATCTCCTTGCTAGTTCAAACGGCTTCTGCAGTCACCATTGCAATGATCATAGGGCTTGCTGTGGCGTGGAAGCTTGCTCTTGTTATGATAGCAGTGCAGCCGCTCACAATCCTTTGCTTTTACACAAGAAAAGTTTTGCTGTCTACACTTTCAACCAAGTTTGTCAAGGCTCAGAATCAAAGCACACAAATTGCAGTGGAAGCAGTTTACAATCATAGGATTGTGACCTCATTTGGAAGCATCCCGAAAGTTCTACTGCTATTTGATAAGGCTCAAGAGGCACCAAGGAAGGAAGCAAGGAAGAAGGCTTGGCTAGCTGGCACTGGAATGGGTTCCGCCCAGTGCCTAACATTCATGTCTTGGGCTTTGGATTTCTGGTATGGTGGTACATTGGTGCAAAAGAGAGAGATATCAGCGGGGGATGTGTTCAAAACATTTTTTGTGTTGGTGAGCACTGGCAAGGTCATAGCTGAAGCTGGAAGCATGACTTCTGACCTTGCCAAGAGCTCAACAGCAGTGGCATCAGTGTTTGAAATTCTTGACAGGCACTCACTGATTCCCAAGGCTGGAGATTATGGAACCAAGTTGGAAAAGATGAGTGGGAAGATAGAGTTGAAGAATGTCGATTTTGCCTATCCAAGCAGGGCAGGGACCCCAATACTGCGCAGGTTTTGCTTGGAGGTGAAGCCAGGGAAAAGTATTGGCCTTGTTGGGAAAAGTGGGTGTGGAAAATCAACAGTGATTGCTTTGATTCAGAGATTCTATGATGTTGAGAGAGGGTATGTCAAAGTGGACAATGTGGACATAAGGGAATTGGACATTCAATGGTATAGGCAGCACACAGCACTTGTTAGCCAAGAACCTGTTATATATTCTGGCAGCATACGTGACAACATTTTGTTTGGGAAGCAAGATGCATCAGAGAATGAAGTGATTGAAGCTGCAAGAGCTGCAAATGCTCATGAGTTCATATCATCATTGAAAGATGGATATGAAACTGAATGTGGAGAGAGGGGAGTACAGTTATCAGGAGGACAAAAGCAAAGAATAGCAATTGCAAGGGCCATAATTCGGAACCCAACAATATTGTTGCTAGATGAGGCAACAAGTGCATTGGACGTGCAATCAGAACAAGTTGTGCAAGAAGCACTTGATAGGATCATGGTAGGAAGAACTACCATTGTGGTGGCACATAGGCTTAACACCATCAAGGAGCTTGACTCAATTGCCTATGTGTCAGAGGGCAAGGTTCTTGAGCAAGGAACCTATGCTCAGCTTAGGCACATGAGAGGTGCATTCTTCAACCTTGCTAGCCATCAAATGCAAACTTAG 3741 0.4416 MPSQKKDELHKGETVMSEKERASSIGIILRYADWVDVMLMLMGAFGAIGDGMSTNILLLFASRIMNSLGFGYNNNNQQSSVNYMAEVEKCSLYFVYLGLAVMVVAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFDSQEATTSEVTSSISKDTSLIQEVLSEKVPLFLMHSSSFISGVAFATYFSWRLALVAFPTLLLLIIPGMIYGKYLIYLSKLSIKEYGKANSIVEQALSSIKTIYSFTAERRIMGRYSDILDRTSRLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGRIYAAGICFIMSGLSLGVVLPDLKYFTEASVAASRIFDMIGRTPAIDGEDTKGVVLERINGKLDFDHVKFTYPSRPDMVVLNDFNLQVEAGKTVALVGASGSGKSTAIALVQRFYDVDEGVVRVDGVDIKSLHLKWIRGKMGLVSQEHALFGTSIKENIMFGKPDATMDEVVAAATAANAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVAHKLSTIRNADLIAVVSGGCIIETGTHNELINCPNGLYAKLAKLQTQFSFDDQDQNQELGVLSAARSSAGRPSTARSSPAIFPKSPLLDDDTTTTPSSLVSHPSPSFPRLLSLNAPEWKQGLIGTISAIAFGSVQPIYALTIGGMISAFFAESHQEMTHRIRTYSLIFSSLSLASIILNLLQHYNFAYMGAKLTKRIRLCMLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVADRISLLVQTASAVTIAMIIGLAVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTKFVKAQNQSTQIAVEAVYNHRIVTSFGSIPKVLLLFDKAQEAPRKEARKKAWLAGTGMGSAQCLTFMSWALDFWYGGTLVQKREISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKSSTAVASVFEILDRHSLIPKAGDYGTKLEKMSGKIELKNVDFAYPSRAGTPILRRFCLEVKPGKSIGLVGKSGCGKSTVIALIQRFYDVERGYVKVDNVDIRELDIQWYRQHTALVSQEPVIYSGSIRDNILFGKQDASENEVIEAARAANAHEFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELDSIAYVSEGKVLEQGTYAQLRHMRGAFFNLASHQMQT* 1247
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3515 1246 Gene3D - 367 630 IPR027417 -
Dod02g3515 1246 PANTHER ABC TRANSPORTER B FAMILY MEMBER 8-RELATED 24 1243 - -
Dod02g3515 1246 CDD ABC_MTABC3_MDL1_MDL2 1006 1243 - -
Dod02g3515 1246 Gene3D ABC transporter type 1, transmembrane domain 92 925 IPR036640 GO:0005524|GO:0016021
Dod02g3515 1246 Pfam ABC transporter 387 536 IPR003439 GO:0005524
Dod02g3515 1246 Gene3D - 996 1246 IPR027417 -
Dod02g3515 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1006 1242 IPR003439 GO:0005524
Dod02g3515 1246 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 342 - -
Dod02g3515 1246 MobiDBLite consensus disorder prediction 626 642 - -
Dod02g3515 1246 CDD ABC_6TM_Pgp_ABCB1_D2_like 673 989 - -
Dod02g3515 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 607 IPR027417 -
Dod02g3515 1246 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Dod02g3515 1246 SUPERFAMILY ABC transporter transmembrane region 28 353 IPR036640 GO:0005524|GO:0016021
Dod02g3515 1246 Pfam ABC transporter 1027 1173 IPR003439 GO:0005524
Dod02g3515 1246 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 24 1243 IPR039421 -
Dod02g3515 1246 MobiDBLite consensus disorder prediction 650 665 - -
Dod02g3515 1246 SUPERFAMILY ABC transporter transmembrane region 670 984 IPR036640 GO:0005524|GO:0016021
Dod02g3515 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g3515 1246 MobiDBLite consensus disorder prediction 626 665 - -
Dod02g3515 1246 Pfam ABC transporter transmembrane region 684 954 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g3515 1246 Pfam ABC transporter transmembrane region 44 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g3515 1246 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 684 971 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g3515 1246 ProSitePatterns ABC transporters family signature. 1145 1159 IPR017871 GO:0005524
Dod02g3515 1246 SMART AAA_5 1033 1225 IPR003593 -
Dod02g3515 1246 SMART AAA_5 396 588 IPR003593 -
Dod02g3515 1246 CDD ABC_MTABC3_MDL1_MDL2 370 607 - -
Dod02g3515 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1244 IPR027417 -
Dod02g3515 1246 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod02g3515 Dod-Chr2 72320160 72329668 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3515 15 1229 Calmodulin-binding Proteins AT2G36910 43.109 0.0 961
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3515 K05658 - gmx:100801088 2121.67
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3515 02 72320160 72329668 Dod02g3515 02 72320160 72329668 ECH