Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3504 ATGCATCAAAATGCAAGTTTCTCTCTTCTTTCATTCTTCCTCTTCCTCACACATGCAACATCTCAGTCTCAGCTGTATGGGCAAGAACATGCAGTCCTGCTAAAGATAAAGCAGTACCTTCACAATCCACCATTCCTAAGTCACTGGACCCCATCAAACACTTCACACTGCAATTGGCCAGAGATCACTTGCACCAATGGATCTGTCACTTCACTGGCTATGATCAATACCAACATCACTCAAACAATACCACCTTTCATATGTGCCCTCTCAAACCTCACATACATTGATTTTCAATTGAACTACATTCCTGGGGAGTTCCCAACATATCTTTATAGCTGCTCCAAGCTGGAGCACCTTGATCTCTCGGAGAACTGCTTTGTTGGCAAGATTCCTGATGACATAGACCACTTGGCTAGCCTCAAGTTTCTTAGCCTTGGTGCCAACAACTTCTCTGGTGATATTCCAGTGAGTATTGGGAGGCTAAAGGAGCTAGCAAATCTTCAACTTTATCAGTGTCAGTTCAATGGTACTATTCCTGATGAAATTGGAAACTTGTCCAACCTTGAAACCTTGCATTTGTTCTCAAACAGCAAGCTCCCTTCAACAAAGTTGCCATCAAGCTTGACCAAGTTGAGCAAGTTGAAGACCTTGTATATGTATGGCTCCAACTTGGTTGGGGAAATCCCTGAATCTATTGGAGAAATGGTGGCTTTGGAGGACTTGGATCTATCACAAAACGGTTTGAGTGGACAAATTCCCAGAGGTTTGTTCATGCTGAAGAATCTAAGCAGTCTGCACCTTTGGAAAAACAGAATTTCTGGGGAGATAGCCGCTGTGGTTGAAGCATTCAACTTGAAAAACCTGGATATTTCACAGAATTATCTAACTGGGAGAATACCAGAAGATTTTGGAAAGCTCAAAAAGTTAACTTTCTTGAGTTTGGCTACGAATCAGTTATCAGGAGAGGTGCCAGAAAGCATTGGTACTCTGCCAGCTTTGACAGATTTTGTTGTTTTCTCCAACAATTTATCAGGTACTCTTCCTAAAGACTTTGGCCGCTACTCAAATCTTGAAACATTTCAGGTTGCATCAAATAGTTTTACAGGAAAGTTGCCAGAGAACTTGTGCTATAATGGAATGTTAGTTGGTTTAACTGCTTTTGACAATAATCTAAATGGAGGGCTGCCAGAATCACTAGGAAATTGCGATGGCCTGCAATATCTGAGAGTAGAAAACAATGAGCTTTCTGGCAACATTCCTAGTGGTCTATGGGCATCTATGAATCTCTCAACATTTATGATAAGCCAGAACAAGTTCACCGGCCAGCTTCCGGAACAAGTTAAGAATCTCTCAAGCTTGGCCGTAAGTTACAATCAATTTTCTGGTAGAATACCAGCTGGAGTGTCTTCCTGGAAGAATGTTGTGGTGTTCAATGCCAGCAGCAACGTCTTCAATGGAAGTATTCCAGAAGAGCTAACAGCACTTCCAAAGCTAACAACTCTCCTGCTTGATCAGAACCAGCTCACAGGGCCACTTCCATCAGATATGATATCATGGAAGTCCCTAATAACTCTAAATTTGAGCCACAATCAACTCTCTGGGGAAATCCCAGCTGCAATTGGTAAGTTACCTGCATTAAATATGTTGGACTTATCAGAAAACAAAATCTCTGGGAAAATTCCACCCCAACTAGCCCTTATGGGACTAACCAACCTCAATTTGTCCTCCAATTATTTGAAGGGGAAGATTCCAAGTGATTTTGAAAACCTTGCATATGATAGAAGCTTTCTGAACAATTCTGGTTTATGTGCTGACACCCCAGTGCTAAAGCTTACCTTGTGCAATTCTGGCCCTCCAACTCAAAGGGCAAGCAACAATGGCCCATTATTGTCACATGCTGAGCTCATAATCCTGCTGGTAATAGCCTCCTTACTGGCCTTTATATCATCACTCTGGTTGATCAGATTTTACAGGAAAAGACAGCAAGAATTGCGCAAGTCGTGGAAACTCACTTCCTTTCAGAGGCTGAGCTTCACAAAATCAAACATTGTGTCATCGATGACAGAAGAGAATATTATTGGCCGCGGTGGATATGGTGCTGTGTACCGAGTTGCTGTTGAACGATTAGGCTATGTTGCTGTGAAAAAGATAAGGAGTAGCAGGGAGTTAGAGCCGAAGCTTGAGAGTTCATTTCTTGCAGAAGTCGAGATATTGAGCAATATTCGTCATAACAACATCGTCAAGTTGCTATGTTGTATCTCCAGTGAGGATTCATTGCTCCTTGTCTATGAGTATCTTGAAAACCATAGCCTTGATAAGTGGCTGCACAAGAAAAGTAAGTCAGGTTCAGTCCATTATGATAACCCCCTTGATTGGCCAAGGAGATTGCATATAGCCATTGGAGCTGCTCAAGGTCTGTGCTACATGCACCATGACTGCTCACCGCCTGTTGTTCATCGAGATGTGAAAACAAGCAACATTCTATTGGATTTAGACTTCAATGCAAAAGTTGCTGATTTCGGTCTGGCAACAATGTTGATCAATTCAGAAGAACTTGCTACCATGTCAGCTGTGGCTGGCACATTTGGCTACATAGCTCCAGAATATGCTCAGACAACAAGAGTCAATGAGAAGATAGATGTCTACAGCTTTGGAGTCATCCTATTGGAACTGACAACTGGGAAAGAAGCTAATCAAGGAGATGAACACTCATCTCTTGCTGAATGGGCATTGCGCCGTCACATTGAGTTGGGAAGCAATTTAGAAGACATTCTGGATGAAGATGTCAAGGAACCTAGTAACTTGGCTGAAATGTGCAGCATCTTCAAACTTGGGGTCGAGTGCACTGCACAAGAGCCGGCTAGTAGACCTTCCATGAAGGAGGTCCTCAAAACATTGATCAACTGCAGTAATTCATTTTCCAAAAAAGAGAAGAATGCTGGTTTCTATGATGATGTTCCCCTTCTTGAGAATTCAAAATGGGAAAAGCATGTATATTGA 3003 0.4226 MHQNASFSLLSFFLFLTHATSQSQLYGQEHAVLLKIKQYLHNPPFLSHWTPSNTSHCNWPEITCTNGSVTSLAMINTNITQTIPPFICALSNLTYIDFQLNYIPGEFPTYLYSCSKLEHLDLSENCFVGKIPDDIDHLASLKFLSLGANNFSGDIPVSIGRLKELANLQLYQCQFNGTIPDEIGNLSNLETLHLFSNSKLPSTKLPSSLTKLSKLKTLYMYGSNLVGEIPESIGEMVALEDLDLSQNGLSGQIPRGLFMLKNLSSLHLWKNRISGEIAAVVEAFNLKNLDISQNYLTGRIPEDFGKLKKLTFLSLATNQLSGEVPESIGTLPALTDFVVFSNNLSGTLPKDFGRYSNLETFQVASNSFTGKLPENLCYNGMLVGLTAFDNNLNGGLPESLGNCDGLQYLRVENNELSGNIPSGLWASMNLSTFMISQNKFTGQLPEQVKNLSSLAVSYNQFSGRIPAGVSSWKNVVVFNASSNVFNGSIPEELTALPKLTTLLLDQNQLTGPLPSDMISWKSLITLNLSHNQLSGEIPAAIGKLPALNMLDLSENKISGKIPPQLALMGLTNLNLSSNYLKGKIPSDFENLAYDRSFLNNSGLCADTPVLKLTLCNSGPPTQRASNNGPLLSHAELIILLVIASLLAFISSLWLIRFYRKRQQELRKSWKLTSFQRLSFTKSNIVSSMTEENIIGRGGYGAVYRVAVERLGYVAVKKIRSSRELEPKLESSFLAEVEILSNIRHNNIVKLLCCISSEDSLLLVYEYLENHSLDKWLHKKSKSGSVHYDNPLDWPRRLHIAIGAAQGLCYMHHDCSPPVVHRDVKTSNILLDLDFNAKVADFGLATMLINSEELATMSAVAGTFGYIAPEYAQTTRVNEKIDVYSFGVILLELTTGKEANQGDEHSSLAEWALRRHIELGSNLEDILDEDVKEPSNLAEMCSIFKLGVECTAQEPASRPSMKEVLKTLINCSNSFSKKEKNAGFYDDVPLLENSKWEKHVY* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3504 1000 SMART serkin_6 688 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3504 1000 ProSiteProfiles Protein kinase domain profile. 688 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3504 1000 Gene3D Ribonuclease Inhibitor 201 468 IPR032675 -
Dod02g3504 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Dod02g3504 1000 SUPERFAMILY Protein kinase-like (PK-like) 680 967 IPR011009 -
Dod02g3504 1000 Gene3D Phosphorylase Kinase; domain 1 670 766 - -
Dod02g3504 1000 Gene3D Transferase(Phosphotransferase) domain 1 767 987 - -
Dod02g3504 1000 SUPERFAMILY RNI-like 285 592 - -
Dod02g3504 1000 SUPERFAMILY L domain-like 35 373 - -
Dod02g3504 1000 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Dod02g3504 1000 Pfam Leucine Rich Repeat 285 307 IPR001611 GO:0005515
Dod02g3504 1000 Pfam Leucine Rich Repeat 570 591 IPR001611 GO:0005515
Dod02g3504 1000 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Dod02g3504 1000 Gene3D Ribonuclease Inhibitor 469 611 IPR032675 -
Dod02g3504 1000 SMART LRR_typ_2 496 520 IPR003591 -
Dod02g3504 1000 SMART LRR_typ_2 544 568 IPR003591 -
Dod02g3504 1000 SMART LRR_typ_2 307 331 IPR003591 -
Dod02g3504 1000 SMART LRR_typ_2 138 162 IPR003591 -
Dod02g3504 1000 SMART LRR_typ_2 236 260 IPR003591 -
Dod02g3504 1000 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 996 - -
Dod02g3504 1000 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Dod02g3504 1000 Pfam Leucine rich repeat 520 557 IPR001611 GO:0005515
Dod02g3504 1000 Pfam Protein kinase domain 690 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3504 1000 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 996 - -
Dod02g3504 1000 Gene3D Ribonuclease Inhibitor 28 136 IPR032675 -
Dod02g3504 1000 Gene3D Ribonuclease Inhibitor 137 200 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3504 Dod-Chr2 71979410 71983460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3504 29 990 Receptor kinase-like Gene Family AT5G25930 51.802 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod02g3504 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3504 - - gmx:100785907 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3504 02 71979410 71983460 Dod02g3504 02 71979410 71983460 ECH