Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3501 ATGGGGAGAGCCACAAGGTGGTTGAAGAACTTGTTTGGGATAAAAGGAAACAAAGAACACAAAGAGAACTCAAATTCTAGAGACCCCAAGAGCATGAAATGCTCTTCTTCTTCTTCTCCTTGTGCTCAGAGTAATTCCAAAGTTCTATGTCACAATCCAGCAACAATACCACCGAACATTTCACCAGCAGAAGCTGCTTGGTTGCAACCCATCTACAGCGAGACAGAGAAGGAGCAGAACAAGCATGCCATTGCTGTTGCAGCAGCAACGGCAGCTGCTGCTGATGCTGCTGTGAAAGCTGCACGGGCTGCAGTGGCAGTGGTTAAGCTCACCAGCCATGGCAGAGGCACCAAGTTTGGTGGCGGACATGGACATGAGATGTGTGCTGCCACCAAGATTCAGACAGTGTTTAGAGGGTACTTGGCAAGGAAGGCACTGAGAGCCTTAAAGGGATTGGTGAAGTTGCAGGCACTTGTCAAAGGGTATTTAGTGAGGAAGCAAGCAACAGAAACATTGCATGGAATGCAGGCACTTATTAGAGCTCAAGCTACAGTTCGGTCTCAGAAATCTCGGGGGTTCATCACCACAAAGAATGAAGCATATAGATCTCAAAACCGTGCACGAAGATCCACGGAGAGATTTGATGACACTAGGAGTGAGTACACTGCTCCAATCCACAGTAGAAGGCTGTCATCTTCATTTGATGCCACAATTAACAACAACACCACCACCAACAACAACAATAACAACAGTGTTGATGGTAGCCCCAAAATAGTGGAAATGGACACTGGTAGGCCTAAGTCAAGGTCACGCAGGACCAACACCTCAATGTCAGATTTTGGTGATGACCCTTCATTCCAGACACTATCCTCTCCCCTCCCAATCCCATTCAGAACACCTGCACGCTTGTCCATGCCAGATCACAGGAATTTTCAAGACTCAGAATGGGGTTTGACAGGTGAAGAGTGCAGATTCTCCACAGCACAAAGCACTCCAAGGTTTGCAAACTCTTGTAGTTGTGGCTCGGTGGTAGCACCCTTGACACCAAAGAGTGTTTGCAATGAGAGCTTGTTCCTAAGGCAGTATGGGAATTTCCCAAACTACATGGCCAGCACACAGTCTTTCAAGGCCAAGTTGAGGTCTCACAGTGCTCCAAAGCAAAGGCCAGAGCCAGGTCCAAGGAAGAGGCTTTCCCTCAATGAGATGATGGAGTCTAGGAGCAGTTTGAGTGGGGTTAGGATGCAGAGGTCATGCTCACAGATTCAGGACGCCATTAACTTCAAGAATGCTGTGATGGGTAGGCTTCACAAGTCCACAGAATCTGGTGGTAGGGAAGCAGATAGGAACTACTTCCAAAAGAGGAGGTGA 1368 0.4788 MGRATRWLKNLFGIKGNKEHKENSNSRDPKSMKCSSSSSPCAQSNSKVLCHNPATIPPNISPAEAAWLQPIYSETEKEQNKHAIAVAAATAAAADAAVKAARAAVAVVKLTSHGRGTKFGGGHGHEMCAATKIQTVFRGYLARKALRALKGLVKLQALVKGYLVRKQATETLHGMQALIRAQATVRSQKSRGFITTKNEAYRSQNRARRSTERFDDTRSEYTAPIHSRRLSSSFDATINNNTTTNNNNNNSVDGSPKIVEMDTGRPKSRSRRTNTSMSDFGDDPSFQTLSSPLPIPFRTPARLSMPDHRNFQDSEWGLTGEECRFSTAQSTPRFANSCSCGSVVAPLTPKSVCNESLFLRQYGNFPNYMASTQSFKAKLRSHSAPKQRPEPGPRKRLSLNEMMESRSSLSGVRMQRSCSQIQDAINFKNAVMGRLHKSTESGGREADRNYFQKRR* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3501 455 Pfam Protein of unknown function (DUF4005) 331 410 IPR025064 -
Dod02g3501 455 MobiDBLite consensus disorder prediction 202 221 - -
Dod02g3501 455 Gene3D - 125 173 - -
Dod02g3501 455 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Dod02g3501 455 Pfam IQ calmodulin-binding motif 153 167 IPR000048 GO:0005515
Dod02g3501 455 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Dod02g3501 455 MobiDBLite consensus disorder prediction 14 39 - -
Dod02g3501 455 MobiDBLite consensus disorder prediction 201 221 - -
Dod02g3501 455 ProSiteProfiles IQ motif profile. 129 154 IPR000048 GO:0005515
Dod02g3501 455 SMART iq_5 148 169 IPR000048 GO:0005515
Dod02g3501 455 SMART iq_5 125 147 IPR000048 GO:0005515
Dod02g3501 455 MobiDBLite consensus disorder prediction 270 293 - -
Dod02g3501 455 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 439 - -
Dod02g3501 455 MobiDBLite consensus disorder prediction 438 455 - -
Dod02g3501 455 PANTHER IQ-DOMAIN 5-RELATED 1 439 - -
Dod02g3501 455 MobiDBLite consensus disorder prediction 237 293 - -
Dod02g3501 455 MobiDBLite consensus disorder prediction 14 28 - -
Dod02g3501 455 MobiDBLite consensus disorder prediction 237 256 - -
Dod02g3501 455 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3501 Dod-Chr2 71921713 71923908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3501 1 414 IQD Protein Family AT3G16490 50.239 6.38e-97 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3501 - - var:108346918 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3501 02 71921713 71923908 Dod02g3501 02 71921713 71923908 ECH