Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3500 ATGTCAAATTTGCATAACATTTTCTATGTTATAGCAATCCTTGTTCTTCTGCAAAACCCCATCAGAACAAATTGCCATACCAAGGGACTTAGACCAAGACGTTCATCAGGGAATGGATTATCCACCAACATGAGTAGAGTGCTGTATTCAGAACAGCAATTCATGAAGTGGGTGAACTTTGTTGGTACCCTCAAACACTCAGTTTTTAAGGTAGCAAAAAATAAGCTCTTTGCCTCTTACACTTTGCACGTTGATAAGAACCCTGCACTTGGAGATTTCACGTCAATTCAAGATGCCATTGATTCCCTTCCGTCCATCAATCTTGTGAGAGTGGTCATCAAGGTCCATGCAGGGGTTTACTCGGAGAAAGTTAACATTCCTGCTTTGAAATCCTTCATAACCATAGAAGGAGCTGGTGCAGATAAAACCATTGTTCAATGGGGTGACACAGCTCAAACACTTGGCCCAGGAGGGAGGCCACTGGGAACCTATGGTTCTGCAACTTTTGCTGTGAATTCACCTTATTTCCTTGCAAAGAACATCACATTCAAAAACACTACTCCTGTTCCTGCACCAGGAGCAATTGGAAAACAGGCAGTGGCATTCAGGATTTCAGCGGACACAGGAGCTTTCCTGGGCTGCAATTTCTTAGGTGCACAGGATACACTTTATGATCATGTGGGCAGACATTACTATAAGGATTGTTATATTGAAGGCTCAGTCGATTTCATATTTGGCAACGCTCTTTCTCTTTATGAGGGGTGTCATGTGCACGCCATAGCACGGAACACAGGGGCACTAACAGCACAAGGGAGGAGCAGTATGATGGAAGACACAGGATTCTCATTTGTGAACTGTAAGGTCACGGGGTCAGGGGCACTGTACCTTGGAAGGGCTTGGGGTCCCTTTTCTCGCGTGGTCTTTGCTTACACCTACATGGACAACATCATCATTCCCAAAGGATGGCATAACTGGGGTGACCCTAACCGTGAAATGACTGTATTCTATGGACAGTACAAATGCACAGGACCTGGAGCTAACTTTGCAGGGAGAGTGTCATGGTCAAGAGAACTCACTGATGAGGAGGCTAAGCCTTTTCTTTCACTTAGCTTTATTGATGGCTCTGAATGGATCAATATTTATTAG 1146 0.4442 MSNLHNIFYVIAILVLLQNPIRTNCHTKGLRPRRSSGNGLSTNMSRVLYSEQQFMKWVNFVGTLKHSVFKVAKNKLFASYTLHVDKNPALGDFTSIQDAIDSLPSINLVRVVIKVHAGVYSEKVNIPALKSFITIEGAGADKTIVQWGDTAQTLGPGGRPLGTYGSATFAVNSPYFLAKNITFKNTTPVPAPGAIGKQAVAFRISADTGAFLGCNFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIARNTGALTAQGRSSMMEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWHNWGDPNREMTVFYGQYKCTGPGANFAGRVSWSRELTDEEAKPFLSLSFIDGSEWINIY* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3500 381 Pfam Pectinesterase 91 374 IPR000070 GO:0030599|GO:0042545
Dod02g3500 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 379 - -
Dod02g3500 381 ProSitePatterns Pectinesterase signature 2. 237 246 IPR033131 -
Dod02g3500 381 Gene3D - 77 380 IPR012334 -
Dod02g3500 381 PANTHER PECTINESTERASE 2 379 - -
Dod02g3500 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3500 Dod-Chr2 71913238 71917681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3500 93 378 Carbohydrate Esterase AT5G47500 51.916 1.08e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3500 K01051 - gmx:100793314 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3500 02 71913238 71917681 Dod02g3500 02 71913238 71917681 ECH