Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3498 ATGGGCAACAAAATTGCGCGCACGACGCAGGTGTCGGCATCGGAGTACTACCTGCACGACCTTCCCTCGACGTACAACCTTGTGCTGAAGGAGGTTCTGGGAAGAGGGAGATTCTTCAAGTCGATTCAGTGCAAGCACGACGAGGGTTTGGTGCTTGTGAAGGTTTACTTCAAGCGCGGTGGCGATTCCAATATCGATCTCAGAGAATATGAGCGCCGCCTCTCTCACATCAAGGACCTCTTCCAATCCATTGATCACCCTCACGTTTGGCCCTTCCAGTTTTGGCAAGAAACAGATAAAGCAGCGTACCTCTTGAGGCAATATTTCTTCCATAATCTGCATGATCGACTGAGCACTCGGCCTTTTCTCAGTTGTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTGAAACAGAGCCACGAGAAGGGAGTATGTCATGGTGATATTAAGTGTGAGAATGTGCTAATTACATCCTCAAATTGGCTGTACCTTGCGGACTTTGCATCTTTCAAACCTACTTACATTCCATATGATGACCCATCGGATTTCTCTTTTTTCTTTGACACTGGTGGAAGAAGGCTTTGTTATCTAGCACCTGAGCGATTTTATGAACATGGAGGGGAGATGCAGGTTGCGCAAGATTCCCCTTTAAAGCCATCTATGGATATATTTGCTGTTGGGTGTGTTATTGCGGAGCTTTTCCTTGAAGGGCAGCCATTGTTTGAGCTGTCTCAACTTCTGGCTTATCGCAGAGGGCAATTTGATCCGAGCCAACATCTTGAAAAAATAGCAGACCTTGGAATCCGTAAGATGATACTACACATGATTCAGTTAGAACCAGAGTCTCGATTTTCTGCTGAAGGATATCTAAAGGAATATGCTGCAGTTGTTTTCCCAACCTATTTTTCACCATTTCTGCATGATTTTTACCGCTGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTATTATGCCAAAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAATAAGTCATCTGATGATTTAAAAGTTACTTCTGGTGAACTTTTGGAAGAGATGGTTGCAAAAGAAAGTGTGAGTTTCATGAAGGACTCACTGATTAGGAGAGAGGACATAGGCAAGGGCTTAGTTCATGATCACTATAGTAGCCTGCTGAAGGATGCTAAAAAAAATAATATTCCATCTGGTCCGCGGCATGTAACTGGAAGTTCACTCAATTCTACCTTTCCTGAAAATCTAAAATATTTGCAATCTTCTGGTGAGCTGCTTCAGGCCATCTCCAATGCATTTCGAGGAAATGGCCATCCCTTTCTGAAAAATATTACTTTGAATGATTTAAATTTTTTAATGTCTGAGTATGATAGTCAATCAGATACATTTGGAATGCCTTTTCTACCATTGCCAAAGGATAGTATGAGATGTGAAGGTATGGTTCTGATAACATCTTTGCTCTGCTCCTGCATACGCAACGTCAAGTTGCCTCACCTGAGGAGAGCAGCCATACTCTTGTTGAGGGCTTCTGCCCTTTTTATTGATGATGAAGATCGATTGCAGCGTGTTGTCCCATATGTGATTGCAATGCTTTCAGATCCATCAGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCTTAGTGCGAGAATTTCCTCCCAGTGATGCAAAGATATTTCCTGAGTATATTCTTCCGATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGAATATGCTATGCCAGCAATATTGCTAAGTTGGCAGTAACTGCTTATGGATTCTTGATTCATTCAATAAGCTTGAGCGAGGCAGGTGTTCTTGATGAATTGAGTTCACCAGCAAAGCCATTGATATCATCCAGTCAGACCTCTGGAAGAGACAGGAGGATAAGTAGTGATGTCCAACTTTTGCAGTTGAGGAAATCGATTGCAGAGGTTGTCCAAGAACTTGTGATGGGTCCGAAGCAAACCCCAAATATTAGGAGAGCACTTCTTCAAGACATTGGTAAACTGTGCTGCTTCTTTGGTGTGAGACAGAGTAATGACTTCCTCTTACCTATCCTGCCTGCTTTCTTAAATGATCGGGATGAACAGTTGAGGACAGTATTCTATGAGAAGATTGTTTATGTCTGTTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATCTATTACCCTACATTGAGCAGGCTTTAAGTGATACTACAGAAACTGTCATTGTTAGAGCCTTAGATTGTTTGACTATTCTATGCAAAAGTGGGTTCTTCAGGAAGCGGATACTGCTTCAAATGATTGAGCGTGCATTTCCTTTATTGTGTTATACCAGTGCATGGGTACGAAGATCAGTTGTCTCTTTCATTGCTGCTAGCAGTGAGAGCTTGGGTGCTGTAGATTCTTATGTTTTCCTGGCTCCTGTTGTTCGGCCTTTCCTCCGTAGACAACCCATGTCTCTTGCTTCAGAGAGGGCTCTTCTGTCATGTTTAAAACCTCCTGTTTCAAGACAGATTTTCTATGAAGTCTGGGAGAGCTCCAGGAGTTCAGACATGTTAGAAAGACAGAGAAAAATATGGTATAGTTCATCACAATCTAAAGTATGGGAAATGGATTTATTGAGAAAAGGAATTGAGGAGTTGGACTCATTAAAGAACTTGATTGACAAACAACAAGGTCATGAGGTTCAACGACCTGTTGGCACTGCCTCCCAACAGCCAGGGCTAAATGATTGTGACAAAGCTGAGGCAAAATTGAGAGATATGGGGGCCTTTATGCATAATGATGGCAATATGGTGGGACATCGTGATCCCCAATCTGTGGAAAAGTTACAGTTTTCAGGATTTATGTCACCACATTTTAGTGGTGTAAACAGTTTGCCATATGAAAAGCCATCAGAAGGCATACCTTTGTACTCCTTCAGCGTGGACAGGCGGAGAATGGGAATCCCACCTGCAGCATCTGATTCTCCTCTACAAATGAATTCTCCGAGTGTCAGCTCATCTGCCATGCCTTGGGTTAATCCACTTAGTAAGTCCTTTAATTTGGCTAGTTCGGTTCCAGCTCCAAAACTTTTTTCAGGTTCATTTAGCATCAGTAATGGTTCTAAACAGTTCCATCGAGTGGTGCATGAACCAGATGGAAGGGAAAATGAGACCCCTTATGTTAATAGCACATTTCAAGATGTGGGATCTACTGATATTAAAGGTACATCAACTTCACTTGAAGATGCAACTGTCCAGACTGATCCATCAGGATTTCCATCTTTTGCTCGAACTTCCATTCCTGATTCTGGCTGGAGGCCCCGAGGGGTGCTGGTTGCACACCTCCAGGAGCACCGTTCAGCTGTCAATGACATAGCGATTTCTGCTGATCATAGCTTTTTTTTGAGTGCATCCGATGACTCTACAGTCAAGATTTGGGATTCCAGAAAGCTGGAGAAGGACATTTCATTCAGGTCAAGGTTAACATATCACCTAGAGGGAAGCCGCGCATTATGTGCAGCAACACTTCCAGGTTCTGCCCAAGTAATAGTTGGAGCATCTGATGGATTAATTCATATGTTTTCTGTTGATCAGATCTCTAGAGGTCTTGGGAATGTTGTTGAAAAGTACTCTGGCATTGCTGATATCACAAAGAAGGATATCAAGGGAGGTGCCATACTAAGCCTTTTGAATTGCCCTTTGGATAATTACACCATCATGTATAGCACCCAGAATTGTGGCATTCATCTTTGGGATACTAGATCAAATTCCAATACCTGGACCCTGAAATCTACTCCTGAGGAGGGCTATGTTCATGCTATGGCATCAGGGCCGTGTGGTGATTGGTTTGTATCAGGGTCATCCAGGGGTGTTATTACTCTCTGGGATTTGAGGTTTCTTATACCTGTGAACTCTTGGCAGTATTCTCTTGCTTGCCCTATAGAAAAGATGTGTCTCTTTCTTCCACCTCCAAATACTTCTCTGCCTTCAGCAGCTAGGCCCCTTGTGTATGTGGCTGCTGGTTGTAATGAAGTTTCTCTTTGGAATGCAGAGAATGGCAGCTGCCACCAGGTACTGAGGATGGTCAATTATGACAGTGATGCTGAAATGTCTGATCTGCCTTGGGCTTTGGCTAGACCTTCAAGTAAGCCAGCTTCTCAATCAGATCCAAGACGAAATGTTAATCACAAGTACGGAGTTGATGAGCTAAATGATCCTCCTTCTCGTCTTCCTGGTATCCGTTCATTACTACCCTTGCCAGGGGGTGATTTATTGACTGGGGGCACGGATTTAAAAATACGTCGATGGGATCATTACAGTCCTGAAAGAAGTTACTGTATTTGTGGACCAAACTTAAAAGGAGTTGGAAATGATGATTTTTATGAATCTAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAGAGACGTCCTCTTACAACCAAGCCGACAGCGAAGGCAGTTCTTGCAGCTGCTGTGATGGATCCTGCCGGTTGCCATCGTGATTCTGTTGTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACTCTTACTATCAAGTGGTAGAGATGGGGCTATCAAGGTTTGGAAGTAA 4599 0.4307 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGGDSNIDLREYERRLSHIKDLFQSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSCVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDSPLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQFDPSQHLEKIADLGIRKMILHMIQLEPESRFSAEGYLKEYAAVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNNKSSDDLKVTSGELLEEMVAKESVSFMKDSLIRREDIGKGLVHDHYSSLLKDAKKNNIPSGPRHVTGSSLNSTFPENLKYLQSSGELLQAISNAFRGNGHPFLKNITLNDLNFLMSEYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAILLLRASALFIDDEDRLQRVVPYVIAMLSDPSAIVRCAALETLCDILPLVREFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLAVTAYGFLIHSISLSEAGVLDELSSPAKPLISSSQTSGRDRRISSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCCFFGVRQSNDFLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDTTETVIVRALDCLTILCKSGFFRKRILLQMIERAFPLLCYTSAWVRRSVVSFIAASSESLGAVDSYVFLAPVVRPFLRRQPMSLASERALLSCLKPPVSRQIFYEVWESSRSSDMLERQRKIWYSSSQSKVWEMDLLRKGIEELDSLKNLIDKQQGHEVQRPVGTASQQPGLNDCDKAEAKLRDMGAFMHNDGNMVGHRDPQSVEKLQFSGFMSPHFSGVNSLPYEKPSEGIPLYSFSVDRRRMGIPPAASDSPLQMNSPSVSSSAMPWVNPLSKSFNLASSVPAPKLFSGSFSISNGSKQFHRVVHEPDGRENETPYVNSTFQDVGSTDIKGTSTSLEDATVQTDPSGFPSFARTSIPDSGWRPRGVLVAHLQEHRSAVNDIAISADHSFFLSASDDSTVKIWDSRKLEKDISFRSRLTYHLEGSRALCAATLPGSAQVIVGASDGLIHMFSVDQISRGLGNVVEKYSGIADITKKDIKGGAILSLLNCPLDNYTIMYSTQNCGIHLWDTRSNSNTWTLKSTPEEGYVHAMASGPCGDWFVSGSSRGVITLWDLRFLIPVNSWQYSLACPIEKMCLFLPPPNTSLPSAARPLVYVAAGCNEVSLWNAENGSCHQVLRMVNYDSDAEMSDLPWALARPSSKPASQSDPRRNVNHKYGVDELNDPPSRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPERSYCICGPNLKGVGNDDFYESKSSFGVQVVQETKRRPLTTKPTAKAVLAAAVMDPAGCHRDSVVSLASVKLNQRLLLSSGRDGAIKVWK* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3498 1532 SMART serkin_6 27 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3498 1532 MobiDBLite consensus disorder prediction 1077 1098 - -
Dod02g3498 1532 Gene3D - 473 628 IPR011989 -
Dod02g3498 1532 Gene3D - 644 826 IPR011989 -
Dod02g3498 1532 SUPERFAMILY WD40 repeat-like 1110 1532 IPR036322 GO:0005515
Dod02g3498 1532 SMART WD40_4 1484 1532 IPR001680 GO:0005515
Dod02g3498 1532 SMART WD40_4 1404 1438 IPR001680 GO:0005515
Dod02g3498 1532 SMART WD40_4 1109 1148 IPR001680 GO:0005515
Dod02g3498 1532 SMART WD40_4 1159 1196 IPR001680 GO:0005515
Dod02g3498 1532 SMART WD40_4 1256 1297 IPR001680 GO:0005515
Dod02g3498 1532 Pfam HEAT repeat 526 554 IPR000357 GO:0005515
Dod02g3498 1532 SUPERFAMILY ARM repeat 414 821 IPR016024 -
Dod02g3498 1532 Gene3D Transferase(Phosphotransferase) domain 1 22 374 - -
Dod02g3498 1532 MobiDBLite consensus disorder prediction 1379 1406 - -
Dod02g3498 1532 MobiDBLite consensus disorder prediction 1077 1099 - -
Dod02g3498 1532 ProSiteProfiles Trp-Asp (WD) repeats profile. 1116 1148 IPR001680 GO:0005515
Dod02g3498 1532 Gene3D - 1221 1532 IPR015943 GO:0005515
Dod02g3498 1532 SUPERFAMILY Protein kinase-like (PK-like) 26 326 IPR011009 -
Dod02g3498 1532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Dod02g3498 1532 CDD STKc_Vps15 16 305 - -
Dod02g3498 1532 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1499 1532 - -
Dod02g3498 1532 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1116 1148 - -
Dod02g3498 1532 Gene3D - 1097 1214 IPR015943 GO:0005515
Dod02g3498 1532 ProSiteProfiles HEAT repeat profile. 694 732 IPR021133 -
Dod02g3498 1532 ProSiteProfiles Trp-Asp (WD) repeats profile. 1499 1532 IPR001680 GO:0005515
Dod02g3498 1532 Pfam WD domain, G-beta repeat 1112 1148 IPR001680 GO:0005515
Dod02g3498 1532 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1532 IPR045162 GO:0004674|GO:0016236|GO:0045324
Dod02g3498 1532 Pfam Protein kinase domain 29 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3498 1532 ProSiteProfiles Protein kinase domain profile. 27 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3498 1532 ProSiteProfiles HEAT repeat profile. 526 558 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3498 Dod-Chr2 71891912 71900345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3498 36 244 MAP Kinase Gene Family AT2G46070 26.636 8.99e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Dod02g3498 Pkinase 3.9e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3498 02 71891912 71900345 Dod02g3498 02 71891912 71900345 ECH