Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3487 ATGTCTCTTCTCCACCTCAACAGTAACAGATTTTCTGGCACTGTTCCTGATACATTCAGAGACCTCATCTCTCTGGAAGAGTTGGACCTCAGCAACAACCAACTCTCAGGTCCTTTCCCCGCTGTTACCTTGTACTTGCCAAGCCTCATCTACTTGGACCTCAGATTCAACTACTTCTCAGGGTCCCTCCCTCAAGAACTCTTCAACAAGAATCTGGATGCATTGTTTCTCAACAACAATCAATTTGAAGGGGAAATTCCTCAGAACCTGGGGAACTCCCCTGCATCAGTGATAAATTTGGCCAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTTGGCTTCATGGGTTCTAAGCTGAAGGAGATTCTCTTCCTTAACAACCAGTTAACTGGTTGCATCCCTGAAGGAGTGGGGATCTTCACAGAGATGCAAGTGTTGGATGTGAGCTTCAATGGACTAATGGGTCATTTGCCAGACACAATATCTTGCCTGCAAGATATAGAAGTCCTTAATTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATCTGCTCTCTGAGAAGCCTTGCAAATCTGACCGTTGCTTACAATTTCTTTTCTGGTTTCAGCCAGCAATGCTCGCGGCTTTTCTTTAGGAATGCGGGCTTTGATTTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCCACCTGAGTGCTCTGTGATCCCAGGTGGTAGCTTGAGTTGTATCAGAATCCCCACACCAAAGCCTCTTGTATGTGGTTCCCTGGCTGTAAGTAGCTCTAAGCACACTGATTCTAGTTTACCATCTCCTTGA 834 0.4556 MSLLHLNSNRFSGTVPDTFRDLISLEELDLSNNQLSGPFPAVTLYLPSLIYLDLRFNYFSGSLPQELFNKNLDALFLNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCIPEGVGIFTEMQVLDVSFNGLMGHLPDTISCLQDIEVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNAGFDFSLNCIPGRDMQRPPPECSVIPGGSLSCIRIPTPKPLVCGSLAVSSSKHTDSSLPSP* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3487 277 PRINTS Leucine-rich repeat signature 25 38 - -
Dod02g3487 277 PRINTS Leucine-rich repeat signature 165 178 - -
Dod02g3487 277 Pfam Leucine rich repeat 4 58 IPR001611 GO:0005515
Dod02g3487 277 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 277 - -
Dod02g3487 277 SUPERFAMILY L domain-like 3 211 - -
Dod02g3487 277 Gene3D Ribonuclease Inhibitor 1 230 IPR032675 -
Dod02g3487 277 PANTHER LRR/EXTENSIN 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3487 Dod-Chr2 71786432 71787265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3487 1 250 Leucine-rich Repeat extension Gene Families AT3G24480 49.609 1.16e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3487 - - gmx:100775544 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3487 02 71786432 71787265 Dod02g3487 02 71786432 71787265 ECH