Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3485 ATGAAGATCGAGGAATTGGACGATGGGGATCGTTGTGGGGACGAAGAGTGGAAGAACGAGAGGCAGATCGTGAGGGTTGACGCCAAGAGAGCGTTGGTTGGAGCAGGTGCAAGGATCCTCTTTTACCCTACGCTTTTGTACAATGTGCTTCGAAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATGAAGTTGACGAGTTTGTATTACTGGGCGCCGTTCCATTCCCTAAAGATGTCCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACACTGAATGAGCCTTATGAGACTTTGGTTCCTTCATCATTGTATCATATTCATGGGATTGATCATCTGGTAATTCCAACAAGGGATTATCTGTTTGCCCCCTCATCTGTGGACATCAGCAGGGCTGTGCAATTCATTCATCAGAATGCAACTTGTGGTAAAACTACTTACGTTCACTGTAAAGCTGGGCGAGGGAGGAGCACAACAATTGTGCTTTGTTATTTGGTTGAATACAAGCACATGACACCCGCTGCTGCCCTGGAATACGTGCGGTCTCGAAGACCTAGAGTGCTGCTAGCACCGTCTCAGTGGAAGGCTGTTCAAAAGTATAGCAAGCGCAGTGCATCTTCGTTACCATACTCTCCCTCTGCAGATGCGGTTCTTATAACCAAAGCTGATCTTGAAGGCTACCACAGCACATGCCATGCTGGTATGGAGCTGGCCATTGTTCCTAAGGTTCCAAAAAAGACTAGGCCCATGATAGCAAGATTGTCTTGCCTGTTTACATCGTTAAAGGTTTCTGGTAGCAGTGTACCAACGTCCAGGCGGCTGCCAGTTTCTGAGGCACTTGCTTGCTAA 852 0.4777 MKIEELDDGDRCGDEEWKNERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFVLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHIHGIDHLVIPTRDYLFAPSSVDISRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQKYSKRSASSLPYSPSADAVLITKADLEGYHSTCHAGMELAIVPKVPKKTRPMIARLSCLFTSLKVSGSSVPTSRRLPVSEALAC* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3485 283 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 203 IPR029021 -
Dod02g3485 283 CDD PTPMT1 60 204 IPR044596 GO:0004721
Dod02g3485 283 Pfam Dual specificity phosphatase, catalytic domain 83 203 IPR000340 GO:0008138|GO:0016311
Dod02g3485 283 PANTHER OS01G0739200 PROTEIN 1 276 - -
Dod02g3485 283 PANTHER - 1 276 - -
Dod02g3485 283 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Dod02g3485 283 Gene3D Protein tyrosine phosphatase superfamily 60 207 IPR029021 -
Dod02g3485 283 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Dod02g3485 283 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Dod02g3485 283 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3485 Dod-Chr2 71752427 71755228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3485 4 263 Protein tyrosine phosphatase (PTP) family AT2G35680 53.177 1.75e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3485 - - gmx:100817410 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3485 02 71752427 71755228 Dod02g3485 02 71752427 71755228 ECH