Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3484 ATGAATAAGATCGGCAACTTGAGCTCTGTGAGCAGCACTGATCTCATAGATGCCAAGCTTGAGGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTCGAAGCCAAGACGGACTGGCTAGGTCTACCAGCAGGAGTGAAGTTTGATCCAACAGACCAAGAACTAATAGAGCATCTTGAAGCCAAAGTGGAGGCAAAGAACATGAAGTCACACCCTCTGATAGATGAGTTCATTCCTACTATTGAAGGAGAAGATGGGATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGCTTGAGCAGGCACTTCTTCCACAGGCCCTCAAAGGCATACACAACGGGGACAAGAAAGAGGAGGAAGATCCAAAACGAGTGTGACTTGCAAGGTGGAGAAACCAGGTGGCACAAGACCGGTAAGACAAGGCCAGTGATGGTGAATGGGAAACAAAAGGGTTGCAAGAAGATCCTTGTCCTCTATACCAATTTCGGGAAGAACAGGAAACCGGAGAAGACCAATTGGGTGATGCACCAATACCATTTGGGGCAGCATGAGGAAGAGAAGGAAGGGGAGCTTGTGGTGTCAAAGATATTCTACCAGACACAGCCAAGGCAGTGTAACTGGTCAGATAGGAGTGCAACAACTGGTGAAGGGAGTGGAGAACCAAATAATAACAATAATGGAAGCAGAAGGGACAGTGGAAGTGGGAGTTGTTCTTCCAAAGAGATTGTTGCTCATAGTCATAGGGATGAGATGTCTGCTGTTGTTGGACTAGTCCCTCCAATCACAAGTTTCACTCATGCCTTGGACATTCAGCAGTTGAAATCAGACCATTTCAGCTTCATCCCATTCAGGAAAACCTTTGATGAGGTTGGAATAGGAGAGGCTTCCACAGCAAGAGAAGTTCAAGCATCGGGGTCATGTGAGGAAGTAGTACATGAACGGCAGCGACCACAACATGTAGTTCATCATCATCAACAACAACAGCAGCAGCAGCAGCAGCAGCAACATCACAATCCACAACATCATCAGATTGCAACCTCAGCTTTCCATATAAGTAGGCCTTCACATCCGATCTCTACCCTTATCTCTCCACCTCCCCTCCACCACACATCCATCATCCTAGACGACAGCTCCTACCAAGTCTCTAGAATAATGCTCCAAAATGAACATTTCCAGCAACAGCATCAGCAGCAACAGCATCATAAACTAGGAGCAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGTTGCACTTCAGCTGATATCAAAGAGGAGTCATCCATCTCCAACGCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTATTGGCCAGATCCTGACAACCCTGATCATCATGGGTAG 1392 0.4713 MNKIGNLSSVSSTDLIDAKLEEHQLCGSKQCPGCGHKFEAKTDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPNNNNNGSRRDSGSGSCSSKEIVAHSHRDEMSAVVGLVPPITSFTHALDIQQLKSDHFSFIPFRKTFDEVGIGEASTAREVQASGSCEEVVHERQRPQHVVHHHQQQQQQQQQQQHHNPQHHQIATSAFHISRPSHPISTLISPPPLHHTSIILDDSSYQVSRIMLQNEHFQQQHQQQQHHKLGARSASGLEELIMGCTSADIKEESSISNAQEAEWLKYSSYWPDPDNPDHHG* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3484 463 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Dod02g3484 463 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Dod02g3484 463 MobiDBLite consensus disorder prediction 331 352 - -
Dod02g3484 463 MobiDBLite consensus disorder prediction 327 352 - -
Dod02g3484 463 MobiDBLite consensus disorder prediction 215 254 - -
Dod02g3484 463 SUPERFAMILY NAC domain 40 208 IPR036093 GO:0003677|GO:0006355
Dod02g3484 463 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Dod02g3484 463 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 446 IPR044799 GO:0003700
Dod02g3484 463 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 4 446 - -
Dod02g3484 463 MobiDBLite consensus disorder prediction 215 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3484 Dod-Chr2 71739865 71745101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3484 11 460 NAC Transcription Factor Family AT5G56620 52.110 6.53e-138 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g3484 NAM 3.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3484 - - gmx:100795246 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3484 02 71739865 71745101 Dod02g3484 02 71739865 71745101 ECH