Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3449 ATGGTAGCCGTAGGGCAGCATTCCCCCATCAGGCTAAGGAGGGAACAATGCAACCGCACTAAACATGATTCTAACTTCTCTTCTTGGAAGATTCTAATTGGCCCTTCTGATTGGGAAGACTATTCCAGTGGAAAGGAAGGATGTGCAAGGTACAGGATCCACAACCTGCCAGAAAAATCAAGCCCTGGAGTGTATGAGCTTGGAATAGCTGTGTCAAGCAGTAGCAGTTTGGGGCGTGAGATTTACAAGCTTGCCCCTGACCGCATAGCCGTTGTTTACCTTGGACAAGCTGACAATGTGAGGGCAAGGCTCCAGCACTATGGCAGAAGTGGTGCTCATTTGGGCTATAGCTGTTCTGATTATGTTATTAGTGCTTCTCTCCAAAAGGGGCGTCCATTGTTTCAGGAGATCTTTTCACAAGGCTACCCTATTGTTTATAGATGGGCTCCTATGCGAAACAAGGAAAATGCTAAGCGAATAGAAGCTCAGCTGCTCAGTACATTTGATTATGCATGGAACACATGCGGCAATGGTGACCGGCGGCCTGATGATATTCTTCAAAAGCTCAAGAAGATTGCTTCTGGCACTAGAACACTTTCAGACATGACCAGGGAGTTCCTACCTTTCGCCCAGAAGCGAGTCGGCGTCCGAATCAAATCAAGCAAGCTTCCTCTCACAGATGACAAATCAGATGAAGAAGACAGTGAGAGCTATGGTTTCCTATCTAGGGTGTTCAAATTCAACAGATCACGTCCTAGGAAAGTTCAGGGTATAACTGGAGCCATTCAGGAGAATGCTAAAATTTGTGGAGTCACATTGAGTGATGGTTCTGTTTGTACAAGGCCCCCAGCTGAAAGAAGAAAGAGGTGTCCTGAACACAAAGGAATGAGAACAAATGTGTCCACTTCCAAAGCAATAATAAGGGAACCCAAGTTAGAGAGCATTGTGGGGCTGGAGCCTGATGTGTATTGTCAAACAAAAGGTAATGGCTACATAGTCCAAAATGTTGGCCATGATGTAGAAGACTCTCCGAAAGTAGCTGTTGATAGTCCTGTTGATGAGGGTATCAGCAACACCAATATATGTGGAATCATCTTGAATGATGGTTCCACTTGTAGAAGACAACCAGTTAAAGGGAGAAAAAGGTGCCAAGAGCACAAAGGGAAGAGAATTCGTGCACCTATTCATGTAAAGCAGTGGCAATATGCAATTTCTGCATAA 1221 0.4505 MVAVGQHSPIRLRREQCNRTKHDSNFSSWKILIGPSDWEDYSSGKEGCARYRIHNLPEKSSPGVYELGIAVSSSSSLGREIYKLAPDRIAVVYLGQADNVRARLQHYGRSGAHLGYSCSDYVISASLQKGRPLFQEIFSQGYPIVYRWAPMRNKENAKRIEAQLLSTFDYAWNTCGNGDRRPDDILQKLKKIASGTRTLSDMTREFLPFAQKRVGVRIKSSKLPLTDDKSDEEDSESYGFLSRVFKFNRSRPRKVQGITGAIQENAKICGVTLSDGSVCTRPPAERRKRCPEHKGMRTNVSTSKAIIREPKLESIVGLEPDVYCQTKGNGYIVQNVGHDVEDSPKVAVDSPVDEGISNTNICGIILNDGSTCRRQPVKGRKRCQEHKGKRIRAPIHVKQWQYAISA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3449 406 Pfam GIY-YIG domain-containing protein 26 186 - -
Dod02g3449 406 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 341 393 - -
Dod02g3449 406 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 341 393 IPR038909 GO:0003677|GO:0006355
Dod02g3449 406 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 4 309 IPR038909 GO:0003677|GO:0006355
Dod02g3449 406 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 4 309 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3449 9 397 HRT Transcription Factor Family AT5G56780 41.250 7.17e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Dod02g3449 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3449 - - lang:109350609 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3449 02 71279601 71282318 Dod02g3449 02 71279601 71282318 ECH