Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3447 ATGGGAAGGAAGTGCTCACATTGTGGAAACATAGGCCATAATTCCAGAACCTGCACATCTCTGAGAGGAACTTTCGTAGGACTTCGCCTCTTTGGGGTTCAACTAGACATATCCTCAACATCCTCATCATCTTGTGTTGCCATGAACATGAACATGAACATGAAGAAAAGCTTCAGCATGGATTCCTTGCCCTCATCATCATCCTCTCCATCTTCCTCCTTTTCCTCTTCTTCAAGAATAACCATTGATGAGAATCCTGCTGACAGAACCTCTATTGGGTATCTATCAGATGGTCTCATAGTTCCACCACAAGAGAGGAAGAAAGGAGTTCCATGGACAGAAGAAGAGCACCGAACATTCCTTGTTGGACTTGAGAAGCTGGGAAAAGGTGACTGGAGGGGTATCTCGAGAAACTATGTGACTACAAGAACTCCAACCCAAGTGGCTAGCCATGCTCAGAAGTACTTTCTTCGATTGGCAATGATTAATAAGAAGAAGAGACGTTCAAGTCTTTTTGACTTGGTTGGCATAGGCAACAAAAATACACCAATATCTCAACCTATTAGCATCTCTAATTGCAACCCTCAAGATCAACAGGTCAAATCCAAATGTGAAGTTGAGAACAATGATGCCACTTTGTCACCTCTAGGTATCCCATTTCAACAAGAGACCAGTTCAGAAGAGCAAAAAACTACTGAATATAAAAGTGTGCCTTTCTGGCTTCATCACGAGCAAATTAATTCTTCAAAGGTGAAACTGGTGGCAATTCCCAGTTCCCCAAATGCAGCAGTGCTTGATCTGGAGCTCACTCTTGCAGCCCCAAAGGCTAAGACCCTGGAGCAAAATGAATCGTCCCCAAGTTCCTTCCTTCTTGGTCCAATTAGTGTGACTTAA 894 0.4329 MGRKCSHCGNIGHNSRTCTSLRGTFVGLRLFGVQLDISSTSSSSCVAMNMNMNMKKSFSMDSLPSSSSSPSSSFSSSSRITIDENPADRTSIGYLSDGLIVPPQERKKGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAMINKKKRRSSLFDLVGIGNKNTPISQPISISNCNPQDQQVKSKCEVENNDATLSPLGIPFQQETSSEEQKTTEYKSVPFWLHHEQINSSKVKLVAIPSSPNAAVLDLELTLAAPKAKTLEQNESSPSSFLLGPISVT* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3447 297 MobiDBLite consensus disorder prediction 278 297 - -
Dod02g3447 297 ProSiteProfiles Myb-like domain profile. 104 156 IPR001005 -
Dod02g3447 297 MobiDBLite consensus disorder prediction 58 80 - -
Dod02g3447 297 CDD SANT 111 156 IPR001005 -
Dod02g3447 297 ProSiteProfiles SANT domain profile. 112 160 IPR017884 -
Dod02g3447 297 SMART sant 108 158 IPR001005 -
Dod02g3447 297 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Dod02g3447 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 160 IPR017930 -
Dod02g3447 297 Gene3D - 110 162 - -
Dod02g3447 297 PANTHER TRANSCRIPTION FACTOR KUA1 1 296 - -
Dod02g3447 297 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 107 158 IPR006447 GO:0003677
Dod02g3447 297 Pfam Myb-like DNA-binding domain 111 156 IPR001005 -
Dod02g3447 297 SUPERFAMILY Homeodomain-like 105 159 IPR009057 -
Dod02g3447 297 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3447 Dod-Chr2 71258199 71260193 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod02g3447 Myb_DNA-binding 2.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3447 - - adu:107490116 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3447 02 71258199 71260193 Dod02g3447 02 71258199 71260193 ECH