Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3431 ATGATGAATTTTTCCATCTTTGGCAAGAAGCGACACCAACTTTGTAGCTCTTTCCTAAACAACTTCTTCCACTTCCATTTCAACTCCTTCTTTATTCAACTATGTTACTTCATGGTTTTTTCACTCTTTGGTTACCTTGGTCTCAAGGTCTCAAAGCCAAGAACCCATGTTAGACCCAATGACTTGGATCTGTTTTACACCTCTGTCTCTGCTTCCACTGTTTCTAGCATGACAGCAGTGGAAATGGAGACTTTCTCCAATTCCCAACTCAATCTCTTAACCTTTCTTATGTTAGTTGGTGGAGAAGTTTTCACTTCCTTCCTTGAACTTGTGTTTGCTAGGTTCATTATTTCCACACAAAACCATAGTGCCAAAAACAGCCTTAGCGATACTAGTCTTTCACTGAAACAGGATCCTCAAATTAATGCCAATTATCAAATTGAGCTTGGTTTAGTTTCTGCTCCTCATCACTCAGAAAACCAGAAACATAGTACTCTTAGTGATGTCAATGATCCAAATGGCAATGTGGTGTCCTTTAACAATAGAGATAGTAGACTTAAGTACAACTCTCTTAGATATCTGAGTTATATAGTTTTTTGTTACCTTTTTGTGTTTCAATTTGTAGGTTCTATTTTGGTCTCTTTGTACGTAACCTTTATACCGAGTGTGAGAAAAGTGCTGAAAGACAAAGGGATCAGAGTGCCAACATTTTCTGTCTTTACCATAGTTTCATCTTTTGCAAATTGTGGCTTTGTCCCCACTAACGAGAACATGATAGTTTTCAAGAAGGATTCAGGTCTTCTTCTTCTCATACTCCCATATTTGCTCCTTGGTAACACCTTGTACCCAGTGTGCTTGAGGCTTGTGATATGGGTTCTTGAGAAAATTACTAAGAGAGAGGAATTCTATTACTTGCTGAAGAATTCGAAAGAGATGGGTTATGGCCATTTGTTCTCTGGTCTTCATAGTTGGCTACTTGCTGCTACTGTGTTGGGTTTCAGTATGATACAGTTTGTTATGTTCTGTTCCTTGGAGTGGAACTCCCAAATTATGGAAGGTCTAAATCCCTACCAGAAATTTGTTGCGTCTTTGTTTCAAATTACAAATGCCAGATACACTGGTGAATCTGTTTTTGATCTCTCCACTATCTCTTCGGCTATATTGGTTCTCTTCGTTGCCATGATGTACCTCCCACCATATACTACATTTTTGCCTGCAAGGAACCAAGAAAATGATGCCAAGACAGAAAAAAGAAGCCTAGTGGAGTGTCTTATTTTTTCTCAACTTTCTTATTTGGTTATTTTCATCATTCTGATATGCATCACTGAGAGCAAAAGCCTAAGAGAGGATCCACTAAACTTTAATGTGTTGAACATCACCATAGAAGTGATCAGTGCATATGGGAACGTAGGATTCTCAATGGGATACAGCTGCGCAAGGCAATTGAAACCCGATGGTATGTGCAAAGATTCATGGGTTGGATCTTCGGGCAGGTGGAGTCCCAAAGGCAAATTCATCCTTATTCTAGTTATGTTCTTTGGGAGGCTCAAGAAATTTAATATGAAAGGTGGCAGAGACTGGAACCTATCCTAG 1593 0.3911 MMNFSIFGKKRHQLCSSFLNNFFHFHFNSFFIQLCYFMVFSLFGYLGLKVSKPRTHVRPNDLDLFYTSVSASTVSSMTAVEMETFSNSQLNLLTFLMLVGGEVFTSFLELVFARFIISTQNHSAKNSLSDTSLSLKQDPQINANYQIELGLVSAPHHSENQKHSTLSDVNDPNGNVVSFNNRDSRLKYNSLRYLSYIVFCYLFVFQFVGSILVSLYVTFIPSVRKVLKDKGIRVPTFSVFTIVSSFANCGFVPTNENMIVFKKDSGLLLLILPYLLLGNTLYPVCLRLVIWVLEKITKREEFYYLLKNSKEMGYGHLFSGLHSWLLAATVLGFSMIQFVMFCSLEWNSQIMEGLNPYQKFVASLFQITNARYTGESVFDLSTISSAILVLFVAMMYLPPYTTFLPARNQENDAKTEKRSLVECLIFSQLSYLVIFIILICITESKSLREDPLNFNVLNITIEVISAYGNVGFSMGYSCARQLKPDGMCKDSWVGSSGRWSPKGKFILILVMFFGRLKKFNMKGGRDWNLS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3431 530 PANTHER SODIUM TRANSPORTER HKT1 1 530 - -
Dod02g3431 530 Pfam Cation transport protein 186 397 IPR003445 GO:0006812|GO:0008324|GO:0055085
Dod02g3431 530 Pfam Cation transport protein 421 481 IPR003445 GO:0006812|GO:0008324|GO:0055085
Dod02g3431 530 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3431 Dod-Chr2 71022519 71027404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3431 49 529 Inorganic Solute Cotransporters AT4G10310 50.204 4.96e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3431 K24976 - gmx:100779582 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3431 02 71022519 71027404 Dod02g3431 02 71022519 71027404 ECH