Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3408 ATGTTGGAAGGTGGTGCGAAATTCCCTGGACTGATAGACCTCAATAAACATACCGATAACTATTATGATTTCTCTCAAGGCTTTTACCATAAGCTTGAGGAGGGTACCAATATGTCGATTGACAGCTTGCAAACAAGTAATGGTGGAGGATCTGTTGCGATGTCTATTGATAATAGCAGTGTTGGGTCCAATGATTCACATACTCGCATATTGAACCACCAGGGGTTGCGAAGGCGTGCGAATGATAACTACTCTGTTGCACAGAGTGTAAATCGTCGAGGAAGAGTCACGCATGCTTTGAGTGATGATGCTTTGGCTCAAGCTTTAATGGATAGTAGTTCACCAACTGAGGGGCTTGAAAATTTTGATGAGTGGACAATTGATTTGAGGAAGCTTAATATGGGTGAGCCTTTTGCTCAAGGAGCTTTTGGGAAACTCTATAGGGGAACCTACAATGGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATGTGGCAAAGGCTCAGTTGATGGAACAACAGTTTCAGCAGGAGGTCATGATGCTGGCTACACTAAAGCATCCTAACATAGTTCGTTTCATTGGTGCATGTCGTAAGCCAATGGTATGGTGCATCGTAACAGAATATGCCAAAGGGGGATCGGTTAGACAGTTCTTAATGAAGCGTCAGAACCGATCAGTTCCCCTCAAATTGGCTGTCAAACAAGCTTTGGATGTTGCTAGAGGGATGGCATATGTTCATGGACTTGGGTTGATCCACAGGGACTTGAAATCTGATAATCTTTTGATTTTTGGTGACAAATCAATTAAAATTGCCGACTTTGGAGTTGCCCGGATTGAGGTGCAAACTGAAGGAATGACACCTGAGACTGGAACATACCGGTGGATGGCTCCGGAGATGATCCAGCATAGGCCTTACACACAGAAAGTGGATGTATATAGCTTTGGGATTGTTCTTTGGGAACTCATCACAGGAATGCTTCCATTTCAGAACATGACGGCAGTACAGGCAGCATTTGCAGTTGTGAACAGAAATGTTCGCCCCATCATACCCAATGACTGCCTGCCTGTTCTCCGTGAAATCATGACAAGATGCTGGGATCCCAACCCTGATGTAAGGCCACCATTTGCGGAAATTGTTGGAATGCTTGAGAATGCGGAGACTGAGATCATGACAACTGTTCGGAAGGCCCGTTTTAGGTGTTGCATGACACAACCAATGACTGCTGACTGA 1242 0.4461 MLEGGAKFPGLIDLNKHTDNYYDFSQGFYHKLEEGTNMSIDSLQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVAQSVNRRGRVTHALSDDALAQALMDSSSPTEGLENFDEWTIDLRKLNMGEPFAQGAFGKLYRGTYNGEDVAIKILERPENDVAKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRQNRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNRNVRPIIPNDCLPVLREIMTRCWDPNPDVRPPFAEIVGMLENAETEIMTTVRKARFRCCMTQPMTAD* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3408 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Dod02g3408 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 404 - -
Dod02g3408 413 Gene3D Transferase(Phosphotransferase) domain 1 215 409 - -
Dod02g3408 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Dod02g3408 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
Dod02g3408 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Dod02g3408 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Dod02g3408 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672|GO:0006468
Dod02g3408 413 CDD STKc_MAP3K-like 139 386 - -
Dod02g3408 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Dod02g3408 413 Pfam Protein tyrosine and serine/threonine kinase 133 385 IPR001245 GO:0004672|GO:0006468
Dod02g3408 413 ProSiteProfiles Protein kinase domain profile. 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3408 413 SMART serkin_6 132 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3408 413 SUPERFAMILY Protein kinase-like (PK-like) 114 386 IPR011009 -
Dod02g3408 413 PANTHER SERINE-THREONINE PROTEIN KINASE 2 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3408 Dod-Chr2 70285887 70288574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3408 24 413 MAP Kinase Kinase Kinase AT2G24360 81.026 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod02g3408 PK_Tyr_Ser-Thr 7.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3408 - - gmx:100788536 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2873 04 52566330 52569777 Dod02g3408 02 70285887 70288574 PCT