Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3402 ATGTCAGTGATAGTGAGGAATGAGGAAAATCAATTATTGCTCCTATGCAAGGGTGCAGACAGGTTTCAATCAACATCCACATGCTTTGTAAATAATGGAGTTTTTGAGGCTGAAACCAAAGATCATATCAAAAGATATGCTGAGGCCGGTTTAAGAACTCTTGTAATTGGATACCGTGAACTTGGTGAAGAAGAATATGAATGGTGGGAAGAGGAGTTTTCGAAGGCCAAAACTTCTCTAGCAGCTGACCGAGATGCATTGGTTGATGCAGCTGCTGATAAGATGGAAAGAAATTTGATACTTCTTGGTGCTACAGCAGTTGAGGATCGACTGCAAAGGGGGGTTCCTGAATGTATTGATAGGCTTGCCAAGGCAGGAATCAAGTTATGGGTATTGACTGGGGACAAGATGGAAACGGCAGTCAACATTGGGCCCATAAATGAATCCTTAGTTTTGGGTAATTAG 465 0.4215 MSVIVRNEENQLLLLCKGADRFQSTSTCFVNNGVFEAETKDHIKRYAEAGLRTLVIGYRELGEEEYEWWEEEFSKAKTSLAADRDALVDAAADKMERNLILLGATAVEDRLQRGVPECIDRLAKAGIKLWVLTGDKMETAVNIGPINESLVLGN* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3402 154 Gene3D - 1 102 IPR023299 GO:0000166
Dod02g3402 154 SUPERFAMILY HAD-like 27 144 IPR036412 -
Dod02g3402 154 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 144 - -
Dod02g3402 154 Pfam haloacid dehalogenase-like hydrolase 52 141 - -
Dod02g3402 154 Gene3D - 103 148 IPR023214 -
Dod02g3402 154 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3402 Dod-Chr2 70177527 70187031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3402 1 144 Primary Pumps ATPases AT3G27870 66.438 1.01e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3402 K01530 - gmx:100779714 203.756