Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3400 ATGGAGCATGTATCAGAAAGAAGATTTCCTCTCAGTGCCAAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGTGTTAGTGCCTCAGTATACAGGGCTCTTTGCATTCCACTCAATGAGACAGTTGCCATCAAGGTGCTTGATCTTGAGAAGTGCAATAATGATTTGGATGGGATTCGGAGAGAGGTACAGACGATGAGCTTGATTGATCATCCAAATGTTTTACGAGCACATTGCTCTTTTACTGCTGGACACAATCTTTGGGTGGTGATGCCGTACATGGCTGGGGGGTCTTGCCTTCATATAATGAAATCTGCTTTTCCTGAGGGTTTTGAAGAGCCTGTTATTGCTACTTTATTGCGTGAGGTTCTTAAAGCACTTGTCTATCTTCACGCCCATGGTCATATACATAGAGATGTTAAGGCTGGGAATATTTTGTTTGATTCTAATGGTGCAGTCAAACTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGATAGGCAACGCTCAAGAAATACCTTTGTTGGAACACCATGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAGGCAGATATATGGTCATTTGGTATAACAGCACTCGAACTTGCTCATGGTCATGCACCTTTTTCCAAGTATCCACCGATGAAAGTTTTGCTTATGACTTTGCAAAATGCCCCTCCAGGTCTTGACTATGAAAGAGATAAGCGATTTTCAAAGTCTTTCAGAGAGTTGGTTGCCGCCTGCTTAGTGAAAGACCCAAAGAAACGTCCTAGTTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACATGCACGTCCCATTGAATATCTTGCTCGCACAGTTCTAGATGGCCTTGCTCCATTAGGAGATCGTTTCAGAATGCTGAAGGCAAAAGAGGCGGATTTATTGGTTCAGAACAAGGCTCTTTATGAGGATAAGGAGCAATTGTCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAATCTGGAGGACTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGACGTGTCAAATGCAGAAGAGCCAGATATAGACAAGAAGCAAAAGGATAAATCTGATGACTTCAGGGCCCCAGCAGAGGGGCTGTCTTCTGTATCAGCTAATCATTTAGATGCTGCACCTACACTGGACAAGGAGGATGGATTCAACAATCTTCAGGATTTGGAGAGTTCACTTGCTTCATTTCCTTGTAAACCTCTTCAAGCACTTAAAGGTTGTTTTGATATGTGTGAGGATGATGTCAATAATACTAGTCCAAGAGATTTTGGTCATGATTATGGAAGAACTAGCAATGAAAGTTCAGGACCAAGTGGTTCATTGCCACAAAATGCTATAGCTCAGCAAAAAAAGTTTTTGAGTGGTTCTTTGCTGCCTGATAGTTTTCTTTCTTCCAAAAAAGTTTCCAACGGTGACAGGGATTATCTGCAAACGAAATATTGTTCGGAGCGGAATCATAGTGGTCCATTGTTATATCGGCAGAAGAGAGACAACAATCTTCCATTGGTTGATGACACATCAGAAGGAGCCATTGTCCAGCGTAAAGGGCGCTTTAAGGTCACATCAGCAGATCTCAGTCCAATGGGTCCTTCAAACTGCATTTGTGGCCCAGTTGGTGGAGGTCCAACCAGTCCACCAAATCAGAACTTCATGGGTGCGGCTATTCTTCAATCACTGCAGTGCATCTTGCAACAGAACAGTTTGCAGAGGGAAGAAATTATTAAGTTAATAAAGTATGCAGAGCAATCTTATGGCAAGAATGCAGAATCAACAGAGGCAGGGGTAGTTGATCCTTTGCAGGTACCACCCGTGACAAGTAGGGAGAAAGAGCTGCATTTTCAGGTGATTCAACTCCAACAGAGCATTGGGACCCTCATTGAGGAATTGCATAGACAAAAGATGAAAAACCTTCAGTTAGAGAAACAATTGAGCTCTATCGATAACAAAGTTGAAAAGTGA 2016 0.4177 MEHVSERRFPLSAKDYKLYEEVGEGVSASVYRALCIPLNETVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSAFPEGFEEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILFDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFRELVAACLVKDPKKRPSSEKLLKHHFFKHARPIEYLARTVLDGLAPLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDVSNAEEPDIDKKQKDKSDDFRAPAEGLSSVSANHLDAAPTLDKEDGFNNLQDLESSLASFPCKPLQALKGCFDMCEDDVNNTSPRDFGHDYGRTSNESSGPSGSLPQNAIAQQKKFLSGSLLPDSFLSSKKVSNGDRDYLQTKYCSERNHSGPLLYRQKRDNNLPLVDDTSEGAIVQRKGRFKVTSADLSPMGPSNCICGPVGGGPTSPPNQNFMGAAILQSLQCILQQNSLQREEIIKLIKYAEQSYGKNAESTEAGVVDPLQVPPVTSREKELHFQVIQLQQSIGTLIEELHRQKMKNLQLEKQLSSIDNKVEK* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3400 671 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3400 671 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3400 671 MobiDBLite consensus disorder prediction 352 389 - -
Dod02g3400 671 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3400 671 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Dod02g3400 671 Gene3D Transferase(Phosphotransferase) domain 1 97 292 - -
Dod02g3400 671 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 668 - -
Dod02g3400 671 MobiDBLite consensus disorder prediction 440 462 - -
Dod02g3400 671 SUPERFAMILY Protein kinase-like (PK-like) 14 304 IPR011009 -
Dod02g3400 671 MobiDBLite consensus disorder prediction 360 377 - -
Dod02g3400 671 CDD STKc_OSR1_SPAK 14 277 - -
Dod02g3400 671 MobiDBLite consensus disorder prediction 442 462 - -
Dod02g3400 671 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Dod02g3400 671 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3400 Dod-Chr2 70121021 70134666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3400 1 668 MAP Kinase Kinase Kinase Kinase AT5G14720 67.493 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Dod02g3400 Pkinase 1.9e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3400 K08835 - gmx:100778837 1131.7