Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3397 ATGGAAATGAAAGAATCAGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTCGGCGGAGCAACTCTAGGACGAATTTTTAACGTGCTTGGCGAGCCTATTGATAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCCGCGCCCGCCTTTATACAGTTAGATACTAAATTATCCATTTTTGAAACCGGAATTAAAGTAGTAGATCTTTTGGCTCCTTATCGCCGTGGAGGGAAAATTGGACTCTTTGGCGGAGCTGGAGTGGGTAAAACAGTACTTATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCGGTATTTGGCGGAGTGGGAGAGCGTACTCGTGAGGGAAATGATCTTTACATGGAAATGAAAGAATCAGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAAATGAATGAACCGCCTGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTCCGAGATGTCAATGAGCAAGACGTACTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCAGGATCCGAAGTATCGGCCTTATTGGGTCGAATGCCTTCCGCTGTGGGTTATCAACCCACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACCTCTACAAAAGAGGGGTCCATAACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTGACCGATCCTGCCCCTGCCACGACATTTGCACATTTAGATGCTACTACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCAGTGGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAACGTTACAAAGAACTTCAAGACATTATAGCTATCCTTGGATTAGACGAATTATCCGAAGAGGATCGTTTAACTGTAGCAAGAGCACGGAAAATTGAGCGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTTGATAGAGAATCCATTAAACTTAAGTTGATCTAG 1104 0.413 MEMKESGVINEQNIAESKVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVDRESIKLKLI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3397 367 CDD F1-ATPase_beta 19 294 - -
Dod02g3397 367 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 69 289 IPR000194 GO:0005524
Dod02g3397 367 PANTHER ATP SYNTHASE 18 359 - -
Dod02g3397 367 Gene3D - 1 367 - -
Dod02g3397 367 TIGRFAM atpD: ATP synthase F1, beta subunit 6 357 IPR005722 GO:0015986|GO:0045261|GO:0046933
Dod02g3397 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 294 IPR027417 -
Dod02g3397 367 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 18 359 - -
Dod02g3397 367 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 292 357 - -
Dod02g3397 367 SMART AAA_5 81 273 IPR003593 -
Dod02g3397 367 ProSitePatterns ATP synthase alpha and beta subunits signature. 280 289 IPR020003 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3397 Dod-Chr2 70113266 70115689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3397 68 353 Primary Pumps ATPases(2) AT1G78900 29.836 8.17e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3397 K02112 - mnt:24286633 658.292