Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3364 ATGGAAACAACCAGCAACAACCACGCCATCGGTGGAGAAGAGCCCAACGACGTCGTTAGACCCTATCCCCAAACACATGAAGAAGAAGAAGAAGAAGAGCACCAGCACCACAACCACACCTCCCAACATCTTAGCGGCGATGGTGCCAGTCCTGGAAAGATTTTTATAGGTGGTTTAGCGAGGGAAACGACCATAGCTCAATTTGTGAAGCACTTTGGTAACTATGGTGAGATTACTGATTCTGTGATCATGAAGGACAGGAAAACCGGCCACCCTCGCGGGTTCGGGTTTATAACTTATGCAGATCCCTCTGTGGTTGACAATGTCATTGAGGACACTCATGTTATCAATGGCAAGCAGGTTGAAATTAAGCGCACGATACCAAGGGGTGCTGTTGGCTCTAAGGATTTTAGGACAAAGAAAATATTTGTAGGAGGGATTCCTTCAACTGTGACTGAAGATGAATTTAGAGACTTCTTTACACGCTATGGAGAAGTCAATGATCACCAGATAATGCGGGACCACTCCACCAATCGTTCTCGAGGCTTTGGGTTTATCACCTTTGACTCTGAGGAAGCTGTTGATGATCTTCTAGCTATGGGGAACAAGATTGAATTTGCTGGAGCTCAGGTTGAAATCAAGAAGGCTGAACCGAAGAAATCAAACCCACCACCGCCATCATCCAAGCGCTATGACTCAAGGTCTTCATATGGTGGTGGATACGGAGATGCTTATGATGGATATGGTGGCAGCTTTGGTGTTGGGGGCTATAGGTCAGGTGGTATGTATGGTGGTCGGAGTAGTGTGTATGGTGCCTATGGAAGTGAGTTTGGTGGGTATGGAGGATATGCTGGTGCAATGGGCCCCTATAGAGGAGATCCTTCCCTTGGATATGCTGGTCGTTATGGTGGAGGCTTTGGCAGCGGCTATGGTCTTGGTGGGTTTGGGGGATCAAGTGAGAATTACGGGTCATATAGTGGTGGTGCTGGTGGTGGTAGTGCCTATCAAAGTGGCTATGATGCCGGCCTAGGGGGTGCATATGGAGGGGCTGGTGGAGGCCCCTTTTATGGAAGTAGAGGATATGGTGCTGGTCGATATCATCCATATGGAAGATAG 1116 0.4821 METTSNNHAIGGEEPNDVVRPYPQTHEEEEEEEHQHHNHTSQHLSGDGASPGKIFIGGLARETTIAQFVKHFGNYGEITDSVIMKDRKTGHPRGFGFITYADPSVVDNVIEDTHVINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVNDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLAMGNKIEFAGAQVEIKKAEPKKSNPPPPSSKRYDSRSSYGGGYGDAYDGYGGSFGVGGYRSGGMYGGRSSVYGAYGSEFGGYGGYAGAMGPYRGDPSLGYAGRYGGGFGSGYGLGGFGGSSENYGSYSGGAGGGSAYQSGYDAGLGGAYGGAGGGPFYGSRGYGAGRYHPYGR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3364 371 MobiDBLite consensus disorder prediction 20 41 - -
Dod02g3364 371 SUPERFAMILY RNA-binding domain, RBD 41 130 IPR035979 GO:0003676
Dod02g3364 371 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 121 IPR000504 GO:0003723
Dod02g3364 371 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 142 210 IPR000504 GO:0003723
Dod02g3364 371 Gene3D - 140 223 IPR012677 -
Dod02g3364 371 MobiDBLite consensus disorder prediction 214 235 - -
Dod02g3364 371 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 52 128 IPR000504 GO:0003723
Dod02g3364 371 SMART rrm1_1 53 124 IPR000504 GO:0003723
Dod02g3364 371 SMART rrm1_1 141 214 IPR000504 GO:0003723
Dod02g3364 371 MobiDBLite consensus disorder prediction 1 50 - -
Dod02g3364 371 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 25 371 - -
Dod02g3364 371 Gene3D - 16 135 IPR012677 -
Dod02g3364 371 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 25 371 - -
Dod02g3364 371 SUPERFAMILY RNA-binding domain, RBD 138 249 IPR035979 GO:0003676
Dod02g3364 371 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 140 218 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3364 Dod-Chr2 69691760 69694627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3364 45 200 Eukaryotic Initiation Factors Gene Family AT1G71770 25.862 3.55e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3364 K12741 K14314 gmx:100793209 392.119