Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3349 ATGGCTAGGAGCTGGATTATTGACATTGGAGGATTTGCAAAGAAGGTGAAGAATACTACACTGTCATCAGATGATCAAATCAAGGACTGTGGAGCACATCGTGAATGCCCAAAATGTCATTACCATATTAATAACAGTGATGTTTCTCCTGAGTGGCCTGGCTTTCCTGTTGGTGTAAAGTTTGATCCTTCTGATGTTGAACTCTTGGAACATTTAGCAGCAAAATGTTGTGTTGGGAACAAAGAGCCCCACATGTTTATTCATGACTTCATCCCAACTATAGAAGGAGACCAAGGAATTTGCTACACACATCCTGAAAATCTTCCAGGTGCTAAGAAAGATGGGGGTAATGTTCATTTCTTTCACAGAACAGTAAATGCATATGCGACAGGACAAAGGAAGCGTCGAAAGATTCATCATGAACAAGGTTTGAGTGAGGAGCACGTGCGCTGGCACAAGACTGGTAAGACCAAAGCTGTAATGGAAGATGGAGTACATAAGGGCTTTAAGAAGATCATGGTTCTTTACATAAGATCAAAGAAAGGGACCAAGCCATACAAATCCAACTGGGTGATGCACCAATACCATCTAGGGAGTGAAGAAGATGAGAAGGATGGTGAATATGTGGTTTCAAAAATATTTTATCAACAGCAGAAGCAAACTGAGAAAAATGAGGAGAATCCAGTGGTTGAAGATTCTGATATGGCATTAAGAACAAGTCCAAGAACACCAAAACCAAATCCCCCCAATCGACCTGGTGCAGGCAAATGTGTTGACTGTGATGACAATTTTGATGAAAATGACCTTATGTTATTCACTAAGGATGGCAAGCCTATACCTGGAGATCCACATGCCCCGCCATCTGATGTTCAGGATGATGACAATGGAGGCAACCTTGCATGGCTGGCTGGTGAATCGCAGGCTGTTGAAAACTCTGACTTTGATGGATTGGAGTTGGATGACATCTTATTATGCAAGGAGATGTTTGATTCTTCTTCTCTCCAAATTGATTCTGGATTGAAGTCCAACACTTACAATGGTTTTGCTTGCAATGCAAATGAATTGGCTGGAAATGATAATGCTTCTTATGGAATTTCGGTCCTCGATACCCTGGAATTGGATACTCCTCCTGATCTTGATCTTTCTAATTTGCAATTTTGTTCTCAAGACAGTATACTTCAGTGGATAGACAAGTTGTTATAG 1203 0.4106 MARSWIIDIGGFAKKVKNTTLSSDDQIKDCGAHRECPKCHYHINNSDVSPEWPGFPVGVKFDPSDVELLEHLAAKCCVGNKEPHMFIHDFIPTIEGDQGICYTHPENLPGAKKDGGNVHFFHRTVNAYATGQRKRRKIHHEQGLSEEHVRWHKTGKTKAVMEDGVHKGFKKIMVLYIRSKKGTKPYKSNWVMHQYHLGSEEDEKDGEYVVSKIFYQQQKQTEKNEENPVVEDSDMALRTSPRTPKPNPPNRPGAGKCVDCDDNFDENDLMLFTKDGKPIPGDPHAPPSDVQDDDNGGNLAWLAGESQAVENSDFDGLELDDILLCKEMFDSSSLQIDSGLKSNTYNGFACNANELAGNDNASYGISVLDTLELDTPPDLDLSNLQFCSQDSILQWIDKLL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3349 400 MobiDBLite consensus disorder prediction 217 259 - -
Dod02g3349 400 Gene3D NAC domain 64 221 IPR036093 GO:0003677|GO:0006355
Dod02g3349 400 MobiDBLite consensus disorder prediction 273 299 - -
Dod02g3349 400 SUPERFAMILY NAC domain 39 216 IPR036093 GO:0003677|GO:0006355
Dod02g3349 400 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 397 - -
Dod02g3349 400 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 397 IPR044799 GO:0003700
Dod02g3349 400 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Dod02g3349 400 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3349 Dod-Chr2 69454351 69459343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3349 33 218 NAC Transcription Factor Family AT4G28500 54.255 3.07e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g3349 NAM 1.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3349 - - gmx:100780662 617.461