Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3348 ATGGTTATAGTAACTGAACTTCTATTAGGTGGAACATTGCGCAAATATCTCTTGAGCATGCGGCCAAAGTGCTTGGATATGCGTGTGGCAGTTGGATTTGCTCTTGATATTGCCCGAGCGATGGAATGCTTACACTCCCATGGGATCATTCACCGCGACCTTAAACCTGATAACTTGATCTTAACAGCAGATCATAAAACTGTTAAACTTGCTGATTTTGGTCTGGCCAGAGAAGAGTCCTTAACAGAGATGATGACTGCTGAAACGGGGACATATCGTTGGATGGCTCCAGAACTTTACAGCACTGTCACCCTAAGACAAGGCGAGAAGAAGCATTACAACCATAAGGTGGATGCCTACAGCTTTGCAATTGTGTTGTGGGAGCTCATCCATAATAAGTTGCCCTTTGAAGGCATGTCTAATCTACAGGCAGCATATGCAGCTGCTTTTAAGAATACAAGGCCCAGTGCTGAAGACCTTCCTGAGGATTTAGCTCTGATTGTAACTTCATGTTGGAAGGAGGATCCAAATGATCGACCCAATTTCAGTCAAATCATACAGATGCTCCTCCGATATCTCTCCACCATTTCTCCGCAAGAGTCAGTTGTTCCTCTGCGGATGACTTTGTCCAAGAATGCTATATTGCCACCAGAATCTCCTGGTACTAGTGCTTTAATGGCTGGTAGAGATGACTCAGGAGAAACCCCTAAAGCCAATATGGAAGACAGGTCTAAAGGGTTTTTCTTCTGCTTTAGCCAGTGTTACTGA 768 0.444 MVIVTELLLGGTLRKYLLSMRPKCLDMRVAVGFALDIARAMECLHSHGIIHRDLKPDNLILTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPSAEDLPEDLALIVTSCWKEDPNDRPNFSQIIQMLLRYLSTISPQESVVPLRMTLSKNAILPPESPGTSALMAGRDDSGETPKANMEDRSKGFFFCFSQCY* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3348 255 PANTHER PROTEIN KINASE ATN1 1 232 - -
Dod02g3348 255 Pfam Protein tyrosine and serine/threonine kinase 2 189 IPR001245 GO:0004672|GO:0006468
Dod02g3348 255 Gene3D Transferase(Phosphotransferase) domain 1 1 212 - -
Dod02g3348 255 SUPERFAMILY Protein kinase-like (PK-like) 2 212 IPR011009 -
Dod02g3348 255 PANTHER SERINE-THREONINE PROTEIN KINASE 1 232 - -
Dod02g3348 255 SMART serkin_6 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3348 255 PRINTS Tyrosine kinase catalytic domain signature 117 139 IPR001245 GO:0004672|GO:0006468
Dod02g3348 255 PRINTS Tyrosine kinase catalytic domain signature 43 61 IPR001245 GO:0004672|GO:0006468
Dod02g3348 255 PRINTS Tyrosine kinase catalytic domain signature 160 182 IPR001245 GO:0004672|GO:0006468
Dod02g3348 255 PRINTS Tyrosine kinase catalytic domain signature 5 18 IPR001245 GO:0004672|GO:0006468
Dod02g3348 255 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3348 255 MobiDBLite consensus disorder prediction 216 238 - -
Dod02g3348 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3348 Dod-Chr2 69449229 69452881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3348 1 255 MAP Kinase Kinase Kinase AT5G50180 80.392 1.70e-157 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod02g3348 PK_Tyr_Ser-Thr 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3348 - - mnt:21403469 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0572 01 10204618 10205999 Dod02g3348 02 69449229 69452881 PCT