Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3341 ATGTCTTCTTCTAGTACATGGACCACTGCGGAAAATAAAGCATTTGAAAGGGCTATAGCCCTTTATGACAAGGACACTCCAGAGCGTTGGAACAATGTTGCTAGGGCTGTTGCTGGAAAAACTCCAGAGGAAGTGAAGAAGCACTACGAGCTCCTCGTTGAGGACATTAAGCGTATTGAGTCAGGGAAAGTGCCCTTTCCAACCTACAAGGGTTCCTAA 219 0.4612 MSSSSTWTTAENKAFERAIALYDKDTPERWNNVARAVAGKTPEEVKKHYELLVEDIKRIESGKVPFPTYKGS* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3341 72 Gene3D - 1 66 - -
Dod02g3341 72 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Dod02g3341 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 70 IPR044636 GO:0003700
Dod02g3341 72 SMART sant 3 55 IPR001005 -
Dod02g3341 72 Pfam Myb-like DNA-binding domain 5 49 IPR001005 -
Dod02g3341 72 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Dod02g3341 72 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 70 - -
Dod02g3341 72 CDD SANT 6 53 IPR001005 -
Dod02g3341 72 SUPERFAMILY Homeodomain-like 7 60 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3341 Dod-Chr2 69223042 69223461 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod02g3341 Myb_DNA-binding 7.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3341 - - qsu:112038618 124.02