Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3338 ATGGATCCACCGCCACCGCTTGCCGCCACCTCCTCCTCCTCCAGCGGCAGCAAGCTCCGCCTGATGTGCAGCTACGGCGGCCAAATCCTCCCCCGCCCACGAACCAACGCCCTCTTCTACGCCGGCGGAGACACCCGCATCGTATCCTTCCAACGCCACGCCCTCTCCACTCTCTCCGCCTTCTCCTCCCACCTCTCCGCCGCACTCTCCGTCCCTTCCCCGTTCCACCTCAAGTACCAGCTCCCTCACCTCCCTCTCGACTCCCTCATCTCCCTCTCCTCCTCCGACGACCTCGCCGCCCTCGTTGACGAGCACCACCGCCTCTCATCTACTCCCCACCGCATCAGATTGTTCCTCTTCCCTCTCCATGCCGAGATCCGACACCCGAAGACTGAAGCTTGGTTCTTCGATGCCCTCAAGAGCTCTAAGATTATGGAAGGTGGTGAGGGTGCTATAATTGCTTCTTCTAATGAGAGTGCTGGGTTTTGTTCCTCTGCAGCCGAGTCTATGGTTTTGGAGACTAGTTCGTCTTTTGGGTCAACTTCGTCTTCCGCTTCGTCGACCAATTTCCCTGCATTGAGGGGTCAGGGGTGTGAGGACAGCGACGCCGTTTTGAAGGATGGGAGAGTGAAGCTGAACTCTTCGGATTCAATCCCATGTAATAATAACGTTTCAACTAGTACTATGTCTCTCCAGCAGAGCCAAGACTTACGTGTTTCAGAGGCCTGGGTCAAAGCTGAATCTATTGCAGCAGAAAGTAGAATCGCTTATATTTCCTCTGTGGCTGCATTTAATAACATGAATGTGGATGTAGGGTATGCCTCATTTCCACAGTTTTATAAAGCGGAGAGCCAAGATTTGCAGTTTGTACAAGCTCCTAACCACTTTTTACCAATTCACCCAAATGGCCTGTTGCCTGTACCATCTTGCCAACCCGTTTACCAGCAACCGCAGCCATTGCAGCATATGGTTTACTATCCTAATCAACTGTGCCCTGTATACCTCGTGCCTTTTGGAAACATGCCTGCCGATCGTTTTCCTATAGCTGCTTCTGGCCAAGCTTCATTGAACCAAAATTCTTCCTTTATAAATTGTCATGCAACTCACATCCCTGAGAGTGGAGCCAAGTCTCCTTTTGATCAGGATTTTGCCTCACAGAATTACTTAACAGACGATGTGACCACATCTTTTGCTCATTTACCTCACAATGGAAATCAGCAACCAGAAATGGATACTTATCCAATGCATTATCAATCACAGAATCTATCTATCACTTCCAGGGAATCCCCCAAGTCTGGAAATGAAATTGATGATGAACTTGCTCATGTTCAGATATACAAATCTCAGCCTCCGCCTCCAACACTGCCTTCCAAATACCAAACCATGTCGAAAGCCACGACAAACCTGTTATCAGAGGCTCTTGCTCAATTGCATGTGTATAATCTCAAGCAGCAGACACAAACATCACAGCCACAGTGA 1479 0.4976 MDPPPPLAATSSSSSGSKLRLMCSYGGQILPRPRTNALFYAGGDTRIVSFQRHALSTLSAFSSHLSAALSVPSPFHLKYQLPHLPLDSLISLSSSDDLAALVDEHHRLSSTPHRIRLFLFPLHAEIRHPKTEAWFFDALKSSKIMEGGEGAIIASSNESAGFCSSAAESMVLETSSSFGSTSSSASSTNFPALRGQGCEDSDAVLKDGRVKLNSSDSIPCNNNVSTSTMSLQQSQDLRVSEAWVKAESIAAESRIAYISSVAAFNNMNVDVGYASFPQFYKAESQDLQFVQAPNHFLPIHPNGLLPVPSCQPVYQQPQPLQHMVYYPNQLCPVYLVPFGNMPADRFPIAASGQASLNQNSSFINCHATHIPESGAKSPFDQDFASQNYLTDDVTTSFAHLPHNGNQQPEMDTYPMHYQSQNLSITSRESPKSGNEIDDELAHVQIYKSQPPPPTLPSKYQTMSKATTNLLSEALAQLHVYNLKQQTQTSQPQ* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3338 492 PANTHER OS05G0427100 PROTEIN-RELATED 1 483 - -
Dod02g3338 492 SMART PB1_new 33 122 IPR000270 GO:0005515
Dod02g3338 492 SUPERFAMILY CAD & PB1 domains 36 123 - -
Dod02g3338 492 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3338 Dod-Chr2 69201983 69205270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3338 19 121 MAP Kinase Kinase Kinase AT1G04700 42.453 1.14e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3338 - - aip:107644557 512.686