Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3336 ATGGATTTCAGTAGTGGTTCAGTTCCACCAAATCAGCCCTCTAATTCTAAGCCAATGCCCCCTTGCCCTCGTCCTCAGGACAGTCAAGAAGAAAAAGAGAGGAAGGCATTGGAGCAATTTTGGCACCAGCAGTTTAGTGATATTCAAAGCAATGAAGCGGAGCCGCAGCATTTGCTCCCAGCTCGGATCAAGAAGATCATGAAGTCTAAAAAGAATATCAAGATGATTAGTTCAGATGCTCCACAAATGCTTGCAAAAGCATGTGAGGTGTTTGTTCAGGAGCTCACCTTTCGAGCATGGATCCATGCTGAATCAAACAAGAAGCGCAGCCTCAAGCACTGCGACGTGGCCATGGCTATTAAGAAAGATGAAGCCTTCAATTTCCTTGCTAATGTTGCTGATTGTGGCCATGATCACCATGATGTCCCTAAGGGAGTAAAGGCTGGAAGCAAAGGAAGCCAAGCTTCCCAATCTCAAGCTGCTGGTTTTGTGCAAAATCCTATGATGAATATGGAGGAAATGATGGAAAGAAACCTCCAGCAGTTGGTTCAACCTCCACCTCTGCCTCCATACAATCTGCCGTCTGATCTATCCGAAATGATGCAGATGAATCCTTATCTGCCGGGTCAATTTCAGACGATGCAAGCTCCATACCTACCTTCTGATGAATCTCAAATGATGCAGCATCAATATCTACCATTGGATCAATCCCAAATGATGCAGCTTCAATATCTGCCGTGTGATGATGATCAAGCTCAATCTCAAATGGTGCATCCTCCTTATCCGCCATCTGATCAGTCTCAAGTGATGCTGCCACCATATCCTTCATCCACAAATCGATTTGAGACGATGCAGCCATCATATCTGCCTAATTCTGATCAATCTCAAATAATGCAGCAACCATATCTGCCTAATACTAATCCATTTCCATACAATTATCATCCCAAGTGA 951 0.4427 MDFSSGSVPPNQPSNSKPMPPCPRPQDSQEEKERKALEQFWHQQFSDIQSNEAEPQHLLPARIKKIMKSKKNIKMISSDAPQMLAKACEVFVQELTFRAWIHAESNKKRSLKHCDVAMAIKKDEAFNFLANVADCGHDHHDVPKGVKAGSKGSQASQSQAAGFVQNPMMNMEEMMERNLQQLVQPPPLPPYNLPSDLSEMMQMNPYLPGQFQTMQAPYLPSDESQMMQHQYLPLDQSQMMQLQYLPCDDDQAQSQMVHPPYPPSDQSQVMLPPYPSSTNRFETMQPSYLPNSDQSQIMQQPYLPNTNPFPYNYHPK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3336 316 MobiDBLite consensus disorder prediction 1 35 - -
Dod02g3336 316 SUPERFAMILY Histone-fold 26 129 IPR009072 GO:0046982
Dod02g3336 316 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 12 231 - -
Dod02g3336 316 MobiDBLite consensus disorder prediction 270 307 - -
Dod02g3336 316 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 60 120 IPR003958 -
Dod02g3336 316 MobiDBLite consensus disorder prediction 256 316 - -
Dod02g3336 316 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 12 231 IPR027170 GO:0003700|GO:0006355|GO:0016602
Dod02g3336 316 Gene3D Histone, subunit A 24 134 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3336 Dod-Chr2 69178141 69181418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3336 37 153 CCAAT-HAP5 Transcription Factor Family AT1G56170 42.975 4.38e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dod02g3336 CBFD_NFYB_HMF 7.9e-13 CL0012