Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3298 ATGGCTCTGCAACCTTCCTTCTCCTCATCTTCTTCTTCCTTCGGCTATGGATGTTCCTATGATGTGTTCCTCAGCTTCAGGGGCACTGATACTCGCTACGGTGTCACCGGCTATCTCTACAAAGCTCTATGTGACCGGGGAATCAACACTTTCATCGATGATGAGGAGCTTCAGCGAGGAGAGGAAATCACACCCTCACTTGTCAAGGCAATTCAAGAGTCTAGGATTGCCATCCCTGTGTTCTCCACCAACTATGCTTCTTCTTCTTTTTGCTTAGATGAACTTGCCAAGATCATTGAGTGCTTTAAGGCAAATGGTCGGTTGGTTTTGCCTGTTTTCTATAAGGTGGATCCTTCTGACGTGCGACATCAAAGAGATAGCTATGCAAAAGCAATGGCTGAGCATGAGGAGAGGTTCAAGGATGACATGGAGAAAGTGAAGAAATGGAGGGAGGCTCTGAGTCAAGTGGCTGATTTGTCTGGCTACCATTTCACAGGCGATGGATATCAACACAAGTTTATTGAGAAGATTGTGGATGCTATCTCAGGAAAGATTAAGCGTGTTTTTTGGTCTAATGCTGATTATCCAGTTGGATTGGAGTACCAAGTGTCAAAAGTAACTTCGCTCATGGATGTTGGCACTAATGATGGAGTCTATATGGTAGGGATCCATGGAATTGGAGGGGTAGGAAAAACAACACTTGCTCTAGCAGTGTATAACTCGATTGCTGACCATTTTGAAAGTTCGTGTTTCCTTGAAAATGTAAGAGAAAATTCAAATAAAAATGGCATGATACATCTTCAAAATATTATTCTTTCTGAATTATTAGGAGAGAAGAAAATTAAGATTATAAGTGTTCAACAAGGAATTTCAATAATACAGCAAAGGCTCCAAAAGAAGAAGGTAATTTTGATTTTGGATGATGTTGACAATCAGGAGCAGTTGCGGAATACTGTTGGAAAACTTGATTTGTTTGGTCCTGGCAGTAGAGTCATCCTTACAACACGTGACAAACATTTGCTAACATGTTATGGGGTTGTAAGAACATATGAGGTAGAATGTTTACATAAGACAGAGGCTCTTCAATTGCTTAGTAGGACGGCTTTTAGAACCGTTAATGTCAACCCTTGTTATGTGGACGTATTAAATCGTGCTGTAACTTATGCTTGTGGACTTCCATTGGCTTTGGAAGTGATAGGTTCCAACTTGTTTGATAAAAGTATAGAAGAGTGGGAATCCGCATTAGATCAATATGAAAGAATTCCCAATAAAAAGATTTATAGTATACTTAAAGCTGGTGAGAGTGTTGCAATTTTGTTGTCCTTGTTGTGGCGGGGTGTTAAAAGTTTGTCATTTTGTCCTTGTACCACCCAATTTCATTTTGCTGTTTCCTTTATGAGTTGTCCTTATCCATATGGCATTCTTTCCCTTTCTGCTGAATGA 1443 0.4019 MALQPSFSSSSSSFGYGCSYDVFLSFRGTDTRYGVTGYLYKALCDRGINTFIDDEELQRGEEITPSLVKAIQESRIAIPVFSTNYASSSFCLDELAKIIECFKANGRLVLPVFYKVDPSDVRHQRDSYAKAMAEHEERFKDDMEKVKKWREALSQVADLSGYHFTGDGYQHKFIEKIVDAISGKIKRVFWSNADYPVGLEYQVSKVTSLMDVGTNDGVYMVGIHGIGGVGKTTLALAVYNSIADHFESSCFLENVRENSNKNGMIHLQNIILSELLGEKKIKIISVQQGISIIQQRLQKKKVILILDDVDNQEQLRNTVGKLDLFGPGSRVILTTRDKHLLTCYGVVRTYEVECLHKTEALQLLSRTAFRTVNVNPCYVDVLNRAVTYACGLPLALEVIGSNLFDKSIEEWESALDQYERIPNKKIYSILKAGESVAILLSLLWRGVKSLSFCPCTTQFHFAVSFMSCPYPYGILSLSAE* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3298 480 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 22 431 - -
Dod02g3298 480 PRINTS Disease resistance protein signature 389 403 - -
Dod02g3298 480 PRINTS Disease resistance protein signature 296 310 - -
Dod02g3298 480 PRINTS Disease resistance protein signature 220 235 - -
Dod02g3298 480 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Dod02g3298 480 Pfam NB-ARC domain 200 424 IPR002182 GO:0043531
Dod02g3298 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 431 IPR027417 -
Dod02g3298 480 Pfam TIR domain 20 186 IPR000157 GO:0007165
Dod02g3298 480 Gene3D - 189 346 IPR027417 -
Dod02g3298 480 SMART till_3 19 159 IPR000157 GO:0007165
Dod02g3298 480 Gene3D - 354 433 IPR042197 -
Dod02g3298 480 Coils Coil 132 152 - -
Dod02g3298 480 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 162 IPR035897 -
Dod02g3298 480 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 431 IPR044974 GO:0006952
Dod02g3298 480 Gene3D - 16 188 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3298 Dod-Chr2 68449501 68460898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3298 5 401 WRKY Transcription Factor Family AT4G12020 28.000 2.13e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3298 - - lja:Lj0g3v0247409.1 543.502