Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3297 ATGGCTCTGCAAGCTTCCTTTTCCTACGATGTGTTCCTCAGCTTCAGGGGCACTGATACTCGCTACGGTTTCACCGGCTATCTCTACAAAGCTCTATGTGACAGGGGAATCAACACTTTCATCGATGATGAGGAGCTTCAGCGAGGAGAGGAAATCACACCCTCACTTGTCAAGGCAATTCAAGAGTCTAGGATTGCCATCCCTGTGTTCTCCACCAACTATGCTGCTTCTTCTTTTTGTTTAGTTGAACTTGCAAAGATCAATGAGTTCTTTAAGGCAAATGATCGGTTGGTTTTACCTGTTTTCTATAAGGTGGATCCTTCTGACGTGCGACATCAAAGAGATAGCTATGCAAAAGCAATGGCTGAGCATGAGGAGAGGTTCAAGGATGACATGGAGAAAGTGAAGAAATGGAGGGAGGCTCTGAGTCAAGTGGCTGATTTGTCTGGCTATCATTTCACAGGCGATGGATATGAACACAAGTTTATTGGGAAGATTGTGGATGCTATCTCAGGAAAGATTAAGCGTGTTTTTTTGTCTAATGCTGATTATCCAGTTGGATTGGAGTACCAAGTGTCAAAAGTAACTTCCCTCATGGATGTTGGCACTAATGATGGAGTCTACATGGTAGGGATCCATGGAATTGGAGGGGTAGGAAAAACAACACTTGCTCTAGCAGTGTATAACTCGATTGCTGATCATTTTGAAAGTTCGTGTTTCCTTGAAAATGTGAGAGAAAATTCAAAAAAAAATGGAATGATACATCTTCAAAAGATTATTCTTTCTGAATTATTAGGAGAAAAGGAAACTACGATTACAAGTGTTCATTACGGAATTTCAATGATGCAGCAGAGGCTCCAAAAAAAGAAGGTACTTTTGATTCTAGATGATGTTGACAATCAGGAGCAGTTATGGACTACTGTTGGAAAACTTGAATTGTTTGGTCGTGGTAGTAGAGTCATCATCACAACACGTGACAAACATTTGCTAACATATCATGGGGTTGAAGGAACATATGAGGTAGAATGTTTATATGAGGCAGAGGCTCTTGAATTGCTTAGTAGGAAGGCTTTTAAAACCATTAATTTCAACCGTTGTTACGTGGACGTATTAAACCGTGCTGTAACTTATGCTTCTGGACTTCCATTGGCTTTGGAAGTGATAGGTTCTCACTTGTTTGGTAAAAGTATAGAAGAGTGGGAATCCGCATTAGATCAATATGAAAGAATTCCCAATAAAAAGATTTATAGTATACTTAAA 1260 0.3992 MALQASFSYDVFLSFRGTDTRYGFTGYLYKALCDRGINTFIDDEELQRGEEITPSLVKAIQESRIAIPVFSTNYAASSFCLVELAKINEFFKANDRLVLPVFYKVDPSDVRHQRDSYAKAMAEHEERFKDDMEKVKKWREALSQVADLSGYHFTGDGYEHKFIGKIVDAISGKIKRVFLSNADYPVGLEYQVSKVTSLMDVGTNDGVYMVGIHGIGGVGKTTLALAVYNSIADHFESSCFLENVRENSKKNGMIHLQKIILSELLGEKETTITSVHYGISMMQQRLQKKKVLLILDDVDNQEQLWTTVGKLELFGRGSRVIITTRDKHLLTYHGVEGTYEVECLYEAEALELLSRKAFKTINFNRCYVDVLNRAVTYASGLPLALEVIGSHLFGKSIEEWESALDQYERIPNKKIYSILK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3297 420 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 420 IPR044974 GO:0006952
Dod02g3297 420 Gene3D - 177 336 IPR027417 -
Dod02g3297 420 Pfam TIR domain 9 176 IPR000157 GO:0007165
Dod02g3297 420 Pfam NB-ARC domain 189 409 IPR002182 GO:0043531
Dod02g3297 420 ProSiteProfiles TIR domain profile. 7 174 IPR000157 GO:0007165
Dod02g3297 420 Gene3D - 3 176 IPR035897 -
Dod02g3297 420 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 151 IPR035897 -
Dod02g3297 420 Gene3D - 343 420 IPR042197 -
Dod02g3297 420 SMART till_3 8 148 IPR000157 GO:0007165
Dod02g3297 420 PRINTS Disease resistance protein signature 285 299 - -
Dod02g3297 420 PRINTS Disease resistance protein signature 209 224 - -
Dod02g3297 420 PRINTS Disease resistance protein signature 378 392 - -
Dod02g3297 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 420 IPR027417 -
Dod02g3297 420 Coils Coil 121 141 - -
Dod02g3297 420 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 12 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3297 Dod-Chr2 68446264 68447863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3297 5 390 WRKY Transcription Factor Family AT4G12020 28.718 2.05e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3297 - - lja:Lj0g3v0247409.1 536.569