Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3253 ATGTTGGACATGACCAACCTTAAAAAAGAAGTTCAGCTAAATGCCGACACCTTCGAAAATATGAGAAGACTTAGAATTCTCATAGTTCGGAATGCACAAGTTTCTGGAGCCCCCATACATCTCCCAAATAATTTGAGAGTTCTTGATTGGAATGAATATCCTTTCTCATCTTTACCAGCTGATTTTTATCCAGAGACACTTGTTGTACTCAACCTGCCCCATAGTCATCTTACAATGGATGAGCCATTCAAGAAGTTTGAGCATTTGACTTTGATGAACATCAGTGATTGTGACTCTATGAGAAAATTACCTGATGTCTCTTCGAGCCCAAATTTAACGAGACTTCTTCTATACAACTGTCCGAACTTAGTTGCCCTTCATGATTCTGTTGGACATCTTGGCAAACTAGTCACATTGAATACTGAAAATTGCCCTAAACTCAAGCATTTTCCACGTGGCCTAAGATCAAAATCTCTTGAATACCTTGATCTTAGCAAGTGTCCTAACATTCAGAGTTTCCCAGATGTTTTGACAAAAGTGGAAAGCATGAAAAATATTGATATAGGAGGGACTGCCATAAAAAAATTTCCAAATTCAATTAAAAACTTTAATGGTCTCGAAGAGTTAGTGCTGACATCTTGCAGAAGTTTTGAGGAGCTGCCTAGTAACAATCCTATGTTCCAAAATATTGAAGAGCTTAATATGGAAGGATGTCCACAACTTCCAAAACTTCTATGGAAATCATTAGAGGACAGGACTGATTGGCTCCCGAACTTAAGTAGGCTCACTCTAAAAAATTGTGATCTATCAGACAAGGATCTTGAATTAATTCTAAGTTGTCTTCTGCAATTGAAATGGTTGGTACTATCGGATAACAACTTCATAACAATCCCTGAATGCATTGAAGATCTTTCTCAACTCCTGCTCCTTCATGTTGATAACTGCAAGCAGCTTAGAGATATTTCAGTGCTTCCACCATACTTACAATACATTGATGCAAGGAATTGCGTATCATTGACTCCCCAATCATCGGATGTAATATTGAGTCAGGCATTTCAGGAGGTTGAGTACATAGACATTGTGGTGCTCAGGACAAAAATTCCAAATTGGTTTGACCATTGTAGCAAAGGAGGGTCTGTGGATTTCTGGGTTCGTAGAAAGCTCCCGGCCATTGCCCTATTTTTCCTTTTAGGAGGTAAAGATGAAAAGAAAACCAATCATACATGTGAATTCCACATGCTCATCAATGACCTCCAAGTATTCCAAGGAAAAGGAGAGTGGCCAGTTGATCATATATGGTTGTTTGATCTGAGAATTCACCTTACGGCAAGGGAGCAACACAGCATCAATGAACACATAAAGTCTGGATGGAATCATATCAAGATCTCATGTATGGTGTTGAATGATCTGGAAAATATGACTATTAAATGCTGTGGAATCCATCTATACAAAGAAAGAATGAACATCCACCATGTCTCCTTCATAAATCCTGATCTCCACGGCTCAGGTACTGCCTACGATAATATAAATGATAGTTTGGACATCTATGATGAAACAAGCTATGATGTTGTCTTCCCTACGGTACTAGCCAAATATTTTACCAAAGAAATTGTAGAGTTCATGGAAATTCTTGGCTATGATGAGGAGTTGGAAGTAGACAGTGACACTGAAAACCAGCACAAGGAAGAGGAACAACATTCAGCTTCCATCAATCATCAGAACCCAGAAAGATGTGAAATGGCTAATAGCGAGAGAAATGCAGGAAAACACGAAGCCGTCGTTACAAGTATCCATGAGAAAGAGCTAATGCATCAGAAGAAAAGAAAATTGAAAGAGGATGGAGATGCACTAGAGTCAAGTAAAACAACAAGTAAAAACAATACAACACAACTAGGCGACAAAATCATATTTGGAGAACAAATCAATGATCCATCAAAGCCTCATGTTTCTGACAGTATTGGCTATGACAAGAGCAAACAAACACCAATTGTTCATGCTGAACCAAATGCAGAAGCCACAGGCCAATTTAGTGAAAACCAAGCAGAGATTTGCCATACTCATTTTCCAGAAAGAATAGATAATGATGGTCAACAATCAGCACCAAATTCAGGAACCTACACAAATATTGTTGAATCTACCATAAATGAAGAGAATATGGAAGCATTCTATGCTTCTGTTGAAGTAGAAACCAGTTCTCAGTCTCATCTCCAACACAACCAACCCAACACTACTGTATCCATCAAAACTAGGCCCAATGAAGAAACACGGAAAGCATTACAGATTCTTAGAGACTTTGTCAGTAAAAAATTCTCTCTTTTGCTACACCCTGGGCGTTCTGGATTAATGAAAGATATTCTAAAGTATCTCCTCAGCTTGTCTCCTGAAGAAGGAGTTTCTCTTAGAACAAAGTCATTGATCTTGAAACTTTCAACAAGTTTTGATCAGTGGAGTTTGGACTATAACAATGCAAGCCTTAAATTTGAGTCAGCAAGTGCAGGGTTATCAAGATCACAGAAAGTGGAAGAGGAACTTGAAGCCAATGTTAAAGACTTCAGGGAAGCAGAGATGGTGGATGAGTTTTTGTGCACTCAGCTGGCATCTTTGGAGGAAAAGAAGAGAGAGCTTGAAGAGCAAATCAGTGTCATGAAAGCTGAGATTGCAGATTTCAGAACAGAGAGAGATAGAGTTGCCAAGAGGAAGAGACAAGTGTTTGAGAATGGGAAAGTGCTCAAAGGTGAAAGTGAAGGTTTGAGGAACCAAGTGCCAACGTTGAAAGCTGAGCAAGAATGGGCTAAGGTAACACAAGCTAGCATTGAAGAAGAGTGGTCAAAGCTTGGAGAACAAGTGATTGGAGGCACGAGTTTTGAAGAGTAG 2874 0.3911 MLDMTNLKKEVQLNADTFENMRRLRILIVRNAQVSGAPIHLPNNLRVLDWNEYPFSSLPADFYPETLVVLNLPHSHLTMDEPFKKFEHLTLMNISDCDSMRKLPDVSSSPNLTRLLLYNCPNLVALHDSVGHLGKLVTLNTENCPKLKHFPRGLRSKSLEYLDLSKCPNIQSFPDVLTKVESMKNIDIGGTAIKKFPNSIKNFNGLEELVLTSCRSFEELPSNNPMFQNIEELNMEGCPQLPKLLWKSLEDRTDWLPNLSRLTLKNCDLSDKDLELILSCLLQLKWLVLSDNNFITIPECIEDLSQLLLLHVDNCKQLRDISVLPPYLQYIDARNCVSLTPQSSDVILSQAFQEVEYIDIVVLRTKIPNWFDHCSKGGSVDFWVRRKLPAIALFFLLGGKDEKKTNHTCEFHMLINDLQVFQGKGEWPVDHIWLFDLRIHLTAREQHSINEHIKSGWNHIKISCMVLNDLENMTIKCCGIHLYKERMNIHHVSFINPDLHGSGTAYDNINDSLDIYDETSYDVVFPTVLAKYFTKEIVEFMEILGYDEELEVDSDTENQHKEEEQHSASINHQNPERCEMANSERNAGKHEAVVTSIHEKELMHQKKRKLKEDGDALESSKTTSKNNTTQLGDKIIFGEQINDPSKPHVSDSIGYDKSKQTPIVHAEPNAEATGQFSENQAEICHTHFPERIDNDGQQSAPNSGTYTNIVESTINEENMEAFYASVEVETSSQSHLQHNQPNTTVSIKTRPNEETRKALQILRDFVSKKFSLLLHPGRSGLMKDILKYLLSLSPEEGVSLRTKSLILKLSTSFDQWSLDYNNASLKFESASAGLSRSQKVEEELEANVKDFREAEMVDEFLCTQLASLEEKKRELEEQISVMKAEIADFRTERDRVAKRKRQVFENGKVLKGESEGLRNQVPTLKAEQEWAKVTQASIEEEWSKLGEQVIGGTSFEE* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3253 957 Coils Coil 858 892 - -
Dod02g3253 957 Coils Coil 834 854 - -
Dod02g3253 957 Gene3D Ribonuclease Inhibitor 157 364 IPR032675 -
Dod02g3253 957 MobiDBLite consensus disorder prediction 578 619 - -
Dod02g3253 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 422 757 IPR044974 GO:0006952
Dod02g3253 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 422 IPR044974 GO:0006952
Dod02g3253 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 796 931 IPR044974 GO:0006952
Dod02g3253 957 MobiDBLite consensus disorder prediction 554 570 - -
Dod02g3253 957 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 422 757 - -
Dod02g3253 957 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 422 - -
Dod02g3253 957 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 796 931 - -
Dod02g3253 957 Gene3D Ribonuclease Inhibitor 2 156 IPR032675 -
Dod02g3253 957 MobiDBLite consensus disorder prediction 552 628 - -
Dod02g3253 957 SUPERFAMILY L domain-like 13 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3253 Dod-Chr2 67771468 67775128 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3253 1 292 WRKY Transcription Factor Family AT4G12020 35.275 2.43e-31 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3253 - - lja:Lj2g3v0582820.1 1267.68