Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3250 ATGAGTGAGCCTTTACCCTCCAAATCCAACGAGCCACAGATTCAGCTTCCAGAAAAATACAGAGCCATTGCTGATCTATTTACTCATATGAGCTGTTCACTTAGATTGCTGCATCTGCGTAAAAAGTCTCCAACTTTTCAAAATGTTTCTCCACCCAGGAAATTTTCCTATGCACATCTTGCGCAGATGAAGTATATGCTTCCTGAAAGCATATGTATAGATAAGGTGGTTGTTCATGATGAGAAGAGCTTGTGTATGAAGCCTGACATTAAGATCACCTTGGTATTTGATGTCATTGAAGAAAACTTTGAAGATGAATCTGCTGACTTGGCTCTCATGCGATATTTTAGTTCTAGGCTTCTTGATTTCTTCACGATGCATCCTGAGGCTACTGATATTCCAGAGGCTATACTACCAGAGCCCTTTCGCCAAAGAGCATGTAGCTTGATTAGTGTGGATTTGCCTAGTAGACAAGTAGACTGTTGCAGAGGTTCTCATGAATTAGATAGCATTCGTGAGTGTAGTAGTGGATGTGCTAAGGATTGCAATTCTTCTGGTTCTGTTTTGCTGCCTCAGGAGGTAGAAGAGAGCTTTGGTCACTCTCTTGAGAATGCCAACCAAATTCAAGAGAAGTTGAAGAACAGGTCGGTTTTCTTGAAAAGTTGGTGCCCGACTGGATCTGCAAAAAGTTGCTTCCTAGTGGATTATAATTGA 714 0.4132 MSEPLPSKSNEPQIQLPEKYRAIADLFTHMSCSLRLLHLRKKSPTFQNVSPPRKFSYAHLAQMKYMLPESICIDKVVVHDEKSLCMKPDIKITLVFDVIEENFEDESADLALMRYFSSRLLDFFTMHPEATDIPEAILPEPFRQRACSLISVDLPSRQVDCCRGSHELDSIRECSSGCAKDCNSSGSVLLPQEVEESFGHSLENANQIQEKLKNRSVFLKSWCPTGSAKSCFLVDYN* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3250 237 SUPERFAMILY "Winged helix" DNA-binding domain 10 142 IPR036390 -
Dod02g3250 237 PANTHER EXPRESSED PROTEIN 9 157 - -
Dod02g3250 237 CDD Cdt1_m 7 141 IPR014939 -
Dod02g3250 237 PANTHER DNA REPLICATION FACTOR CDT1 9 157 IPR045173 GO:0003677|GO:0030174|GO:0071163
Dod02g3250 237 SMART CDT1_2 16 140 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3250 Dod-Chr2 67632040 67635577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3250 10 130 Core DNA Replication Machinery Family AT2G31270 41.860 1.27e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3250 K10727 - gmx:102670055 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3250 02 67632040 67635577 Dod02g3250 02 67632040 67635577 ECH