Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3241 ATGTCAACCCCTCAAGTCATAACCTGCAAAGCTGCAGTGGCATGGGGAGCTGGAGAGGCACTGGTGATGGAGGAAGTGCAGGTAAGCCCCCCTCAAGCAATGGAGATCCGGATTAAGGTTGTCTCCACCTCCCTCTGTCGCAGCGACCTTTCAGCCTGGGAATCTCATGCCATATTTCCTCGCATATTTGGCCACGAAGCATCAGGGATTGTTGAAAGCGTCGGCCAAGGAGTCACTGAATTCAAAGAGGGAGACCATGTGCTAACAGTATTCATTGGAGAATGCATGGAATGCAGGCAGTGTACATCTGGAAAAAGTAACATCTGTCAAGTTTTGGGATTGGAAAGAAAAGGTTTAATGCATAGTGATCAGAAGACACGCTTCTCAATAAAAGGGAAGCCTGTATATCATTATTGTGCTGTTTCAAGTTTCAGTGAATATACAGTAGTCCACTCTGGATGTGCTGTGAGAGTCAGCCCCGATGCACCTCTTGAGAAAATTTGCCTGCTGAGCTGTGGAGTTGCTGCAGGTCTAGGTGCAGCATGGAATGTTGCTAATGTGTCAAAAGGATCAACAGTGGTGATATTTGGTCTTGGAGCTGTTGGTCTTTCTGTTGCACAAGGTGCTAAACTAAGGGGTGCATCTCGAATAATTGGTGTTGACAACAATCCACAAAAGTGTGAAAAAGCAAAAGCTTTTGGGATTACAGAAGTTGTTGACCCGAATTCCTACAATGAACCTATTGCTCAGGTTATTAAGCGCATAACTGATGGTGGGGCAGATTTTTCTTTTGAATGTGTAGGTGACACTGATATGATAACCACTGCATTGCAGTCATGCTGCGATGGATGGGGTTTGACTGTAACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCAGCTCATTATGCACTTTTCTTAATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCTAAATCTGATCTTCCTTCACTAGTAGAGAAGTATGTGAACAAGGAAATACAGATTGATGACTACATAACACACAATTTGCCGTTTGAAGACATTAACAAGGCTTTCAATCTCATGAGGGAAGGAAAATGTCTTCGTTGTGTAATCCACATGCCAAGATAA 1125 0.4391 MSTPQVITCKAAVAWGAGEALVMEEVQVSPPQAMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGQGVTEFKEGDHVLTVFIGECMECRQCTSGKSNICQVLGLERKGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVRVSPDAPLEKICLLSCGVAAGLGAAWNVANVSKGSTVVIFGLGAVGLSVAQGAKLRGASRIIGVDNNPQKCEKAKAFGITEVVDPNSYNEPIAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYALFLMGRTLKGSLFGGWKPKSDLPSLVEKYVNKEIQIDDYITHNLPFEDINKAFNLMREGKCLRCVIHMPR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3241 374 SUPERFAMILY GroES-like 3 182 IPR011032 -
Dod02g3241 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Dod02g3241 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 336 IPR036291 -
Dod02g3241 374 CDD alcohol_DH_plants 7 371 - -
Dod02g3241 374 Gene3D - 12 367 - -
Dod02g3241 374 SUPERFAMILY GroES-like 320 371 IPR011032 -
Dod02g3241 374 Gene3D - 177 315 - -
Dod02g3241 374 PANTHER ALCOHOL DEHYDROGENASE 4 372 - -
Dod02g3241 374 Pfam Zinc-binding dehydrogenase 200 324 IPR013149 -
Dod02g3241 374 Pfam Alcohol dehydrogenase GroES-like domain 35 152 IPR013154 -
Dod02g3241 374 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 4 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3241 Dod-Chr2 67536092 67540155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3241 12 109 Monolignol Biosynthesis Gene Families AT2G21730 36.190 1.20e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3241 K00001 - gmx:100819938 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3241 02 67536092 67540155 Dod02g3241 02 67536092 67540155 ECH