Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3239 ATGGATGAACAAAATATTATTGGCAGAGGTGGATTCGGTACAGTGTACCGTTTTGCTGTTGATGGTTCAGGCCATGTTGCTGTGAAAAAGATTCGGAATGACAGGAAGTTAGAACTTGAGAGTTCATTTCGCGCTGAAGTTAAAATATTGAGCAATATTCGTCATAACAACATTGTGAGGTTGTTGTGTTGTATTTCCAATGAAGAGTCTATGCTCCTTGTTTATGATTATATGGAAAATGGTAGCCTAGATAAGTGGCTACACAAGAAGAGTTATAAGTCATCATCAGGTATGTCAGGTTTAGTCCATCATGCTGTCCTTGATTGGCCAAAGAGGTTGCAAATAGCCATAGGAATTGCTCAAGGCTTGAGCTACATGCACCATGACTGCTCACCACCTATTGTCCATAGAGATGTGAAAACAAGCAACATCCTTTTGGATCCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTGATAAAGCCGGGTCAAATGAATACCATGTCAACTGTGATGGGATCATTTGGCTATATAGCTCCAGAATATGCTCAAACAAGAAGAATCAGTGAAAAGATTGATGTATTTGGTTTTGGTGTTATCCTATTAGAGCTGACAACCGGTAAAGAAGCTAACTATGGAGACCAACACTGTTCTCTTGCTGAGTGGTCAGGGCGCCACAATCAGATGGGAAGCAACATAGAAGATCTTCTAGACAAAGATGTCGTGGAACCAAGTTGCTTGGATGAAATGTGCAGAGTTTTCAAACTTGGGGTCATGTGTACTTCAATACAGCCTGCTAATAGGCCTTCTATGAAAGAGGTTCTGCAAGTGTTGCTCCTCATTAGAGAACCATATGGTTATGGAGAGAGGAACTTAGCCCACTATGATGTTGTTCCACTTCTTAGGAGTTCAGAAAAAGAGACAAGTTTGGATGTTGTTGACAATATATAA 963 0.4039 MDEQNIIGRGGFGTVYRFAVDGSGHVAVKKIRNDRKLELESSFRAEVKILSNIRHNNIVRLLCCISNEESMLLVYDYMENGSLDKWLHKKSYKSSSGMSGLVHHAVLDWPKRLQIAIGIAQGLSYMHHDCSPPIVHRDVKTSNILLDPQFNAKVADFGLARMLIKPGQMNTMSTVMGSFGYIAPEYAQTRRISEKIDVFGFGVILLELTTGKEANYGDQHCSLAEWSGRHNQMGSNIEDLLDKDVVEPSCLDEMCRVFKLGVMCTSIQPANRPSMKEVLQVLLLIREPYGYGERNLAHYDVVPLLRSSEKETSLDVVDNI* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3239 320 CDD STKc_IRAK 7 285 - -
Dod02g3239 320 ProSitePatterns Protein kinases ATP-binding region signature. 7 30 IPR017441 GO:0005524
Dod02g3239 320 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Dod02g3239 320 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3239 320 SUPERFAMILY Protein kinase-like (PK-like) 4 285 IPR011009 -
Dod02g3239 320 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3239 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Dod02g3239 320 PIRSF ILK 2 290 - -
Dod02g3239 320 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 313 - -
Dod02g3239 320 Gene3D Transferase(Phosphotransferase) domain 1 78 294 - -
Dod02g3239 320 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 313 - -
Dod02g3239 320 Pfam Protein kinase domain 3 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3239 Dod-Chr2 67529665 67531465 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3239 3 282 Receptor kinase-like Gene Family AT5G25930 58.099 3.85e-106 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod02g3239 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3239 - - aip:107641433 489.189