Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3237 ATGAATGAACAAAATATTATTGGCAGAGGTGGATTCGGTACAGTGTACCGTTTTGCTGTTGATGGTTCAGGCCATGTTGCTGTGAAAAAGATTCGGAACGACAGGAAGTTAGAACTTGAGAGTTCATTTCGCGCTGAAGTTAAAATATTGAGCAATATTCGTCATAACAACATTGTGAGGTTGTTGTGTTGTATTTCCAATGAAGAGTCTATGCTTCTTGTTTATGATTATATGGAAAATGGTAGCCTAGATAAATGGCTACATAAGAGTTATAAGTCATCATCAGGTATGTCAGGTTTAGTGCATCATGCTGTCCTTGATTGGCCAAAGAGGTTGCAAATAGCCATAGGAATTGCTCAAGGCTTGAGCTACATGCACCATGACTGCTCACCACCTATTGTTCATAGAGATGTGAAAACAAGCAACATCTTTTTGGATCCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTGATCAAGCCAGGTCAAATGAACACCATGTCAACTGTGATTGGATCATTTGGCTATATAGCTCCAGAATATGTTCAAACAACAAGAATCAGTGAAAAGATAGATGTATTTGGCTTTGGGGTTATCCTATTAGAGCTGACAACTGGTAAAGAAGCTAACTATGGAGACCAACACTCTTCTCTTGCAGAGTGGTCAAGGCGCCACAATCAGATGGGAAGCAACATAGAAGATCTTCTAGACAAAGATGTCGTGGAACCTAGTTGCTCGGATGAAATGTGCAGAGTTTTCCAACTTGGGGTCATGTGTACTTCAATACAGCCTGCTAATAGGCCTTCTATGAAAGAGGTTCAGCAAGTGTTGCTCCGCATTAGAGAACCATATGGTTATGGAGAGAGGAATTTAGGCCACTATGATGTTGTTCCACTTCTTAAGAATTCAGAAAAAGAGACAAGTTTGGATGTTGTTGATAATTTATAA 960 0.3969 MNEQNIIGRGGFGTVYRFAVDGSGHVAVKKIRNDRKLELESSFRAEVKILSNIRHNNIVRLLCCISNEESMLLVYDYMENGSLDKWLHKSYKSSSGMSGLVHHAVLDWPKRLQIAIGIAQGLSYMHHDCSPPIVHRDVKTSNIFLDPQFNAKVADFGLARMLIKPGQMNTMSTVIGSFGYIAPEYVQTTRISEKIDVFGFGVILLELTTGKEANYGDQHSSLAEWSRRHNQMGSNIEDLLDKDVVEPSCSDEMCRVFQLGVMCTSIQPANRPSMKEVQQVLLRIREPYGYGERNLGHYDVVPLLKNSEKETSLDVVDNL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3237 319 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3237 319 ProSitePatterns Protein kinases ATP-binding region signature. 7 30 IPR017441 GO:0005524
Dod02g3237 319 Gene3D Transferase(Phosphotransferase) domain 1 78 293 - -
Dod02g3237 319 SUPERFAMILY Protein kinase-like (PK-like) 4 282 IPR011009 -
Dod02g3237 319 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Dod02g3237 319 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 312 - -
Dod02g3237 319 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 312 - -
Dod02g3237 319 SMART serkin_6 1 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3237 319 Pfam Protein kinase domain 3 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3237 319 CDD STKc_IRAK 7 284 - -
Dod02g3237 319 PIRSF ILK 1 292 - -
Dod02g3237 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3237 Dod-Chr2 67510609 67512466 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3237 3 281 Receptor kinase-like Gene Family AT5G25930 56.890 1.09e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod02g3237 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3237 - - aip:107641433 484.567