Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3233 ATGAGCTTGGCCTTTAACATAAGCATTTACTATGTGGTCTGGTCATTGCTTCTTCTGTTGTTGAGCAATAATAGCATCATGGTGTTGTGCAATGATCTGAGTTTCTATCCTGAAGAAAGAGATGCCTTGTTGCTCATAAGGGATTCTTTAAGTTCTTCTGCCAATCTGCATGGGAATTGGACAGGCCCTCCTTGTATAAACAATCAAAGTAAATGGTTTGGTATCACTTGTTCCAATTGGCATGTTGTTCACATTGTCCTTGAAGGTATTAATCTTAGTGGCTCTTTGCCTCCTACATTCCTTCAGAACATCACTTTCTTGAGCCAAGTTAGCTTCAGAAACAATTTGCTTTCTGGGACACTGCCAAATCTAACCAATTTGGTGTCTTTGGAACAAGTGATACTTTCAAATAATCATTTCTATGGGCCAATTCCTGCGGATTATGTTGGTCTGCCTAGCCTAAAAGTGTTGGAGCTGCAAGAGAATTACTTAGATGGTGAAATCCCACCTTTTGATCAACCATCATTGGCAAGTTTCAATGTGTCATACAACCATCTTGTGGGGCCAATTCCTGAAACTACTGTGCTCCAAAGGTTCTCAAAGAGTTCCTTTGACAATAATTCAGATCTTTGTGGAAGGCCATTGGATAAGTTATGTCCAGATGAACCTCCTGCCCCATCTCCTGCTCCATTTCCTGCACCGCCTCCTGCTATTCCAAAACATAAGAAGAGACTAAAAGTTTGGATTATTGCTTTGATTGCTGCTTCAGCTTCTGTGTTTCTCCTTCTGATCTTTATTGGTTTATTAGTTTTTAAGAAAAGGGCAAGTAGGAAAGGAACAAGAAGAAATGATCCAGCAGGGCATGTATTTGGAGCATGGGCAAAGAAGATGGCGTCTAATTCAGGGAAAAATGATGGTTCTGAAAGATTAGGCAGATTGGAATTCTCCAACAATAAGTTTTCAGTTTTTGACTTGGACGATTTGTTAAGGGCATCAGCAGAAATGCTAGGAAAGGGGAATTTAGGCATTACATATAGAGCCACACTTGAATCTGGCACTGATGTTGCTGTCAAGAGACTCAGCTACATGGATGAATTGAGCAAGAAGGAATTTCACCAGCAGATGCAATTGCTGGGAAACATGAAGCATGAAAATCTAGTAGAAATGATCTCCTTCTATCATTCAGAGGAGCAAAAGCTGGTCATATATGAGCTTATGTCTGATGGCAGTTTGTTTGAGCTCCTACATGGTTAG 1254 0.4043 MSLAFNISIYYVVWSLLLLLLSNNSIMVLCNDLSFYPEERDALLLIRDSLSSSANLHGNWTGPPCINNQSKWFGITCSNWHVVHIVLEGINLSGSLPPTFLQNITFLSQVSFRNNLLSGTLPNLTNLVSLEQVILSNNHFYGPIPADYVGLPSLKVLELQENYLDGEIPPFDQPSLASFNVSYNHLVGPIPETTVLQRFSKSSFDNNSDLCGRPLDKLCPDEPPAPSPAPFPAPPPAIPKHKKRLKVWIIALIAASASVFLLLIFIGLLVFKKRASRKGTRRNDPAGHVFGAWAKKMASNSGKNDGSERLGRLEFSNNKFSVFDLDDLLRASAEMLGKGNLGITYRATLESGTDVAVKRLSYMDELSKKEFHQQMQLLGNMKHENLVEMISFYHSEEQKLVIYELMSDGSLFELLHG* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3233 417 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 13 416 - -
Dod02g3233 417 Gene3D Phosphorylase Kinase; domain 1 295 405 - -
Dod02g3233 417 MobiDBLite consensus disorder prediction 219 236 - -
Dod02g3233 417 Gene3D Ribonuclease Inhibitor 36 221 IPR032675 -
Dod02g3233 417 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 416 - -
Dod02g3233 417 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Dod02g3233 417 ProSiteProfiles Protein kinase domain profile. 330 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3233 417 SUPERFAMILY L domain-like 36 212 - -
Dod02g3233 417 Pfam Protein tyrosine and serine/threonine kinase 334 416 IPR001245 GO:0004672|GO:0006468
Dod02g3233 417 MobiDBLite consensus disorder prediction 217 236 - -
Dod02g3233 417 SUPERFAMILY Protein kinase-like (PK-like) 334 416 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3233 Dod-Chr2 67472209 67473633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3233 39 417 Receptor kinase-like Gene Family AT1G48480 36.259 8.23e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod02g3233 PK_Tyr_Ser-Thr 5.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3233 - - aip:107641436 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3233 02 67472209 67473633 Dod02g3233 02 67472209 67473633 ECH