Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3223 ATGAGAAACTCTGAAGCAACTCAAGTGGCTATGGAGATAGAGGCAACCAAGCCTGCAGGGAATGGAGCAGCAGTGCCAGGGTTGAGCCCTCTGAGTGAGACCCTTTGGAGGGAAAAGACTAACACAGAGTTCCTTGGAGATGTCTCAGCAAGGCTCACATGGAAGGATCTGACCGTGACGGTCACTCTCAGCAATGGAGCGACACAGAATGTTTTGGAGGGGCTATCTGGTTATGCTGAGCCTGGAACCTTCACTGCTCTCATGGGGCCATCAGGTTCAGGAAAATCCACTCTCCTTGATGCTCTTTCTAGTCGCCTTGCTGCAAATGCATTTCTCTCAGGCACCATCCTCCTCAATGGTCGCAAAGCAAAGCTCTCTTTTGGCACTGCAGCTTACGTGACACAAGATGACAACTTGATTGGCACCCTAACAGTGAGAGAAACCATTTCATATTCAGCTCGCCTTCGCTTGCCTGATAAGATGCCATGGTCAGATAAGCGAGCTCTTGTTGAGAGCACCATTGTGGCAATGGGTCTTCAGGATTGTGCTGACACAGTGATTGGAAACTGGCACTTGCGTGGGATCAGTGGAGGGGAGAAGAGAAGGGTTAGCATTGCCTTGGAGATATTGATGAGGCCTAGATTGCTCTTCCTTGATGAGCCTACCAGTGGACTTGACAGTGCTTCGGCATTCTTTGTGACTCAGACACTGCGTGCTTTAGCAAGAGATGGGCGAACTGTGATAGCTTCTATTCATCAACCTAGCAGTGAAGTGTTTGAACTCTTTGACCAATTGTACTTGCTTTCTGGGGGCAAAACTGTTTACTTTGGCCAGGCTTCTGAAGCATATGAGTTCTTTGCACAGGCTGGCTTTCCATGCCCTGCTTTGAGGAATCCATCAGATCATTTCCTTAGGTGCATCAACTCTGACTTTGACAAAGTCAAGAGCACTCTTAAAGGGTCCATGAAACTGAGGTTTGAAGGAAGTGATGATCCCCTGGACAAGATCACTACTGCTGAAGCTATCAGAACTCTTATTGACTACTTCCGCACTTCCCAGCACTCTTATGCTGCGATACAAAAAGTAAATGAGATATCCAATTTTGAAGGAACAGTGCTTGATGCAGGAGGAAGCCAGGCTAGTTTCTTGATGCAGTCTTACACCTTAACCAAGCGATCATTCATCAACATGTCAAGGGATTTTGGTTACTACTGGCTTAGGCTTGTAATCTACATTGTAGTCACAATCTGCATTGGAACCATTTATTTGAATGTGGGGACAGGCTACAACTCAATTCTGGCTAGAGGCTCATGTGCATCATTTGTCTTCGGTTTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTTAATGGTCACTATGGTGTCATAGCATTTGTCGTCAGCAACACATTATCTGCAATGCCTTTCCTGATATTGATCACTTTTCTCTCCGGAACAATTTGTTACTTCATGGTTAGGCTTCATCCGGGATTTTGGCATTACGTCTTCTTTGTGTTGTGCCTTTATGCCAGTGTCACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGCATTGTCCCCAACTTCCTCATGGGCATCATAATTGGAGCAGGGATTCAGGGCATATTCATGTTGGTATCTGGCTACTTTAGGCTCCCACATGATATTCCAAAGCCAATTTGGCGCTATCCAATGTCATATATCAGTTTCCACTTCTGGGCCTTACAAGGGCAATACCAAAATGATCTACAAGGCTTGATCTTTGACAACCAGACACCAGACCTTCCGAAGATACCAGGATGGTACATCCTGGAGAACGTCTTTCAGATTGATGTAAAGAGATCGAAGTGGATAGATTTGAGTGTGATCTTCAGCATGATTGTGATCTACCGCATTATCTTCTTCATCATGATCAAGATCAATGAGGATGTGACACCTTGGGTTAGAGGGTACATTGCTAAGAGAAGAATGCAGCAGAAGAGTGGAACTCAGAACACAACTATTGCACCTGATGTTCTTACTCAGTCCCCATCTCTTAGAACCTATGTTTCCACTCAAACAAGGAATGGTACTTCCAAGAGTTAA 2124 0.452 MRNSEATQVAMEIEATKPAGNGAAVPGLSPLSETLWREKTNTEFLGDVSARLTWKDLTVTVTLSNGATQNVLEGLSGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKSTLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYFRTSQHSYAAIQKVNEISNFEGTVLDAGGSQASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVIAFVVSNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYVFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPIWRYPMSYISFHFWALQGQYQNDLQGLIFDNQTPDLPKIPGWYILENVFQIDVKRSKWIDLSVIFSMIVIYRIIFFIMIKINEDVTPWVRGYIAKRRMQQKSGTQNTTIAPDVLTQSPSLRTYVSTQTRNGTSKS* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3223 707 CDD ABCG_EPDR 49 277 - -
Dod02g3223 707 Pfam ABC-2 type transporter 252 308 IPR043926 GO:0140359
Dod02g3223 707 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 295 IPR003439 GO:0005524
Dod02g3223 707 Pfam ABC-2 type transporter 385 591 IPR013525 GO:0016020|GO:0140359
Dod02g3223 707 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 697 - -
Dod02g3223 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 289 IPR027417 -
Dod02g3223 707 Pfam ABC transporter 73 223 IPR003439 GO:0005524
Dod02g3223 707 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Dod02g3223 707 PANTHER OS04G0528300 PROTEIN 2 697 - -
Dod02g3223 707 SMART AAA_5 81 252 IPR003593 -
Dod02g3223 707 Gene3D - 45 290 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3223 Dod-Chr2 67270169 67276132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3223 82 283 Calmodulin-binding Proteins AT2G36910 31.925 1.26e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3223 K05681 - gmx:100803731 1283.86