Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3212 ATGATTGATTTAGTATATCACAGGACCGTTCCTTGCTCAAGGGACGAGACCCTCGCAGCTCGTCCCCTCCAATGTGCGTCCCACGTACGGGACCGTTCCCTCACAGGATTTTATGCTCACGGGACCTCCGGCAACCTCTCCTCCGGCCCCGCCTACATCTCCGCCGTGGTCATCCCTAAACTCTCCTCCAGATTTTCGATTGGATTACTTGTTCAAAGTTCCTTGTTATTCTCAATCATGGCAACTAGGCTTCAGTTTGAGAATTCTTGTGAAGTTGGAGTGTTTTCTAAACTAACCAATGCCTATTGTTTGGTTGCCATTGGAGGCTCCGAAAACTTCTACAGTGTATTTGAAGCTGAGTTAGCTGATGTTATCCCTGTGGTCAAAACATCCATTGGTGGCACTCGAATTATTGGTCGTCTTTGTGCTGGAAACAAAAATGGGCTTCTCTTGCCCCATACCACTACAGATCAAGAACTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGAATAGATGAAAGATTATCTGCTCTGGGAAATTGTATAGCATGTAATGACCATGTGGCCCTTACACACACTGATCTTGACAGGGAGACGGAGGAAATGATTGCGGATGTTCTTGGAGTGGAAGTTTTCCGGCAGACCATTGCTGGTAACATTCTTGTTGGTAGTTACTGTGCCTTCTCCAACAGAGGTGGTTTGGTCCACCCCCATACTTCCGTAGAAGACTTGGATGAACTTTCTACGCTTCTTCAGGTTCCTCTGGTGGCTGGGACCGTGAACCGAGGTAGTGAAGTGATAGCTGCTGGAATGGCAGTTAATGATTGGACAGCATTTTGTGGTTCAGACACAACGGCCACAGAGCTCTCTGTGATTGAGAGTGTTTTCAAGCTGAGGGAAGCACAGCCTAGTGCCATTGTGGATGAAATGAGGAAATCCCTCATTGATAGCTATGTCTGA 975 0.4677 MIDLVYHRTVPCSRDETLAARPLQCASHVRDRSLTGFYAHGTSGNLSSGPAYISAVVIPKLSSRFSIGLLVQSSLLFSIMATRLQFENSCEVGVFSKLTNAYCLVAIGGSENFYSVFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGMAVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3212 324 TIGRFAM eIF-6: putative translation initiation factor eIF-6 83 303 IPR002769 GO:0042256|GO:0043022
Dod02g3212 324 Pfam eIF-6 family 83 282 IPR002769 GO:0042256|GO:0043022
Dod02g3212 324 SMART eIF6neu2 82 283 IPR002769 GO:0042256|GO:0043022
Dod02g3212 324 Hamap Translation initiation factor 6 [eif6]. 69 324 IPR002769 GO:0042256|GO:0043022
Dod02g3212 324 SUPERFAMILY Pentein 80 303 - -
Dod02g3212 324 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 80 324 IPR002769 GO:0042256|GO:0043022
Dod02g3212 324 CDD IF6 81 302 IPR002769 GO:0042256|GO:0043022
Dod02g3212 324 Gene3D - 80 304 - -
Dod02g3212 324 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 80 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3212 Dod-Chr2 67092189 67122770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3212 80 324 Eukaryotic Initiation Factors Gene Family AT3G55620 92.245 6.46e-173 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3212 K03264 - ming:122066887 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3212 02 67092189 67122770 Dod06g1512 06 20207782 20211848 PCT