LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g3211	ATGGATAAAGAAGATGGTGCAAACCATAGGAATGGTGATGGTGTACATGACATAGAAAATGAAGGTTTGCTTGATGCGAAGGAGGAAATCCAGAGGCACTGGTCAGAGCTGTCTGAAAGGAACATGACAGAGCCACTTCTTAGGAAGAGGACTAACACCACCTCCCAGATTGCCATAGTCGGTGCCAACCTCTGCCCTATTGAAAGCCTTGACTATGAGGTCTACACTCTACACTTAAACTTCTGGTTTAATTTTTTTCGCTTGACTTGGTATCAAGCTTCTATGAGCAAAGAAGGACCTATGGTGCATACAGGTGCATGCATAGCTTCTTTATTGGGGCAGGGTGGATCTCGCAAGTATGGCTTGACTTGGACTTGGCTTAGATATTTCAAAAATGACCGAGACCGGCGAGACATGATAACTTGTGGTGCAGCTGCTGGTGTTGCTGCCGCCTTTCGTGCTCCAGTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCGGCTTCATGGTGGCGAAGTGCTCTTTTGTGGAGGACATTTTTCACAACAGCAGTTGTTGCTATTGTTTTAAGAGCCGCAATTCAGTTTTGTGCCACGGGGAAATGTGGCCTATTTGGGGAAGGAGGTTTGATAATGTATGATGTCAGTTCAGCCAAGGTAACATATAGTGGTGGTGACATAGTAGCAACATTAATATTGGGAATCATTGGAGGCATTCTTGGAAGCATATATAATTACCTCGTGGATAAGGTTGTTCGCACATATAGCATCATCAATGAGTATGTCCTCACATTCAAGTTAAATAATTGTTATGCATTATTGGTAAATATAATATATGATAGAGTTCAATTGTGTTTCTTGATCCATATAGCCATCCCCACTTACTGGGATAAGACTTTGTTGTTGTTGTTGTTGCATAGTAGTTGTTGTTGTTGTTGTTGCATTTACTAG	948	0.4262	MDKEDGANHRNGDGVHDIENEGLLDAKEEIQRHWSELSERNMTEPLLRKRTNTTSQIAIVGANLCPIESLDYEVYTLHLNFWFNFFRLTWYQASMSKEGPMVHTGACIASLLGQGGSRKYGLTWTWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAAIQFCATGKCGLFGEGGLIMYDVSSAKVTYSGGDIVATLILGIIGGILGSIYNYLVDKVVRTYSIINEYVLTFKLNNCYALLVNIIYDRVQLCFLIHIAIPTYWDKTLLLLLLHSSCCCCCCIY*	316

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod02g3211	315	PANTHER	CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER	95	267	-	-
	Dod02g3211	315	Gene3D	Clc chloride channel	91	297	-	-
	Dod02g3211	315	PANTHER	CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER	33	75	-	-
	Dod02g3211	315	PANTHER	CHLORIDE CHANNEL PROTEIN CLC-C	95	267	-	-
	Dod02g3211	315	PANTHER	CHLORIDE CHANNEL PROTEIN CLC-C	33	75	-	-
	Dod02g3211	315	PRINTS	Plant CLC chloride channel signature	180	190	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Dod02g3211	315	PRINTS	Plant CLC chloride channel signature	198	205	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Dod02g3211	315	PRINTS	Plant CLC chloride channel signature	166	174	IPR002251	GO:0005247\|GO:0006821\|GO:0016020
	Dod02g3211	315	SUPERFAMILY	Clc chloride channel	94	268	IPR014743	-
	Dod02g3211	315	Pfam	Voltage gated chloride channel	94	264	IPR001807	GO:0005247\|GO:0006821\|GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g3211	Dod-Chr2	67083051	67086866	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g3211	1	90	Ion Channels	AT5G49890	44.681	1.90e-11	63.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g3211	K05016		-	jre:108982434	294.278