Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3193 ATGCCCACCATGAAAAAGAATTCTGAACTAACTTGTATGGGATCTGTATTCAACAAGCTGGCAAAGCAACTTGGAGAACCTGTTGACTTTGAACTTCCAGCTTGGTTTACCAAGTCCAAGCCACCATATACATCCATAAGGCGCAATAGATATCTCTTTAAGAAGGCCAAGAGACGACGGTTTGATGATGATGGCATATTCTGTTCCTGTACTCCTACACCTGAATCTACTAGTGTCTGTGGTATAGATTGCGACTGTGGGGTGCTTCTGTCTAGCTGTTCTTCAGCCTGTAAATGTGGAAGTGACTGTCTTAACAAACCCTTTCAGCGTCGTACAATGAAAAAGATGAAATTGGTTAAGACTGAGAAATGTGGTTCTGGTATTGTGGCGGCTGAAGATATTAAGCTAGGGGAGTTTATTGTAGAATATGTTGGAGAAGTTATTGATGACAAAACATGCGAAGAAAGGCTTTGGATCATGAAACATCGTGGGGAAACAAATTTTTACTTGTGCGAAATCAGTCGAGATATGGTGATTGATGCGACATATAAGGGAAACAAATCCAGATATATCAATCATAGTTGCTGCCCTAATACTGAGATGCAGAAATGGATAATCAATGGTGAGACAAGAATTGGCATATTTGCTGCTCGTGACATACAAAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGAATGCTACTGTGGCGCTGTTGGCTGTAGACATAAGCTGGGTGTCCGACATCCCAAACCTAAAATTTCAGTTGCATGTCAGGTATATCAGAATGGAAGTTTACAAGTTGGAAGGTCTTTTGTTGTTGACCAATTAAAGTGCTTTCAGAGTTGCATCGGGGAAGTTATTAGAATAAAATGCCTCAGAAATGTGAGGTTTGGGATTATTAAATGGTTCAATGAATGTTCCCGAAAACATTTGATCATGTTTGAAGATGGCTGTGTTGAAATTTATGACATGTCAAAAGAAGAATGGGAACTTGGAAGATTGTGA 1029 0.3984 MPTMKKNSELTCMGSVFNKLAKQLGEPVDFELPAWFTKSKPPYTSIRRNRYLFKKAKRRRFDDDGIFCSCTPTPESTSVCGIDCDCGVLLSSCSSACKCGSDCLNKPFQRRTMKKMKLVKTEKCGSGIVAAEDIKLGEFIVEYVGEVIDDKTCEERLWIMKHRGETNFYLCEISRDMVIDATYKGNKSRYINHSCCPNTEMQKWIINGETRIGIFAARDIQKGEHLTYDYQFVQFGADQECYCGAVGCRHKLGVRHPKPKISVACQVYQNGSLQVGRSFVVDQLKCFQSCIGEVIRIKCLRNVRFGIIKWFNECSRKHLIMFEDGCVEIYDMSKEEWELGRL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3193 342 ProSiteProfiles Post-SET domain profile. 237 253 IPR003616 -
Dod02g3193 342 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 284 IPR025787 -
Dod02g3193 342 ProSiteProfiles SET domain profile. 114 231 IPR001214 GO:0005515
Dod02g3193 342 PANTHER SET DOMAIN PROTEINS 12 265 - -
Dod02g3193 342 SMART PostSET_3 237 253 IPR003616 -
Dod02g3193 342 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 272 339 - -
Dod02g3193 342 Gene3D SET domain 23 265 IPR046341 -
Dod02g3193 342 PANTHER SET DOMAIN PROTEINS 272 339 - -
Dod02g3193 342 Pfam SET domain 125 230 IPR001214 GO:0005515
Dod02g3193 342 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 265 - -
Dod02g3193 342 SUPERFAMILY SET domain 40 243 IPR046341 -
Dod02g3193 342 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0018024
Dod02g3193 342 SMART set_7 114 237 IPR001214 GO:0005515
Dod02g3193 342 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0018024
Dod02g3193 342 CDD SET_ASHR3-like 115 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3193 Dod-Chr2 66930113 66939526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3193 87 249 C2H2 Transcription Factor Family AT2G23740 34.066 2.73e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod02g3193 SET 6.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3193 - - gmx:100808183 574.704