Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3178 ATGGGGTGTTCAGTTACAGTTACTTCAGTGCTTCTTGTTACCCTCTTCTTCTCTCTCCTTCTGGTTTTGAAACCAACATGTGTTCGTGGGAATGATGAGCTTAGAGCACTGTTGGATTTGAAGGCCACTTTGGATCCAGACAGCACCTACCTCTCCTCTTGGACCATCAATGGCAACCCTTGTGGTGGCTCCTTTGAAGGGGTTGCTTGCAATGAGAAGGGTCAGGTTGCAAATGTTTCTTTGCAAGGGAAAGGCCTCTCTGGGAAGCTTTCACCTTCCATTAGTGGCCTCAAGCACTTGACTGGTCTCTACTTGCATTACAACTCTTTGTATGGAGATATACCAAGAGAGATTGCAAACTTGACTCAGCTCAGTGATTTGTATCTGAATGTGAATCATCTCTCTGGTGAAATCCCTCCTGAGATTGGCAAGATGGAGAACCTGCAAGTTTTGCAGCTTTGTTATAACCAGTTGACAGGAAGCATACCTACACAGCTTGGTGATTTGAAAAAGCTTAGTGTTCTTGCTCTGCAGTCAAACCAGTTAACTGGTGCTATCCCTGCTAGTCTAGGTGATTTGGGAATGATGATGAGGCTCGATTTGAGCTCTAATCATCTCTTTGGTTCCATTCCCTCTAGACTAGCCGATGTTCCTTCCCTACAAGTTCTGGATGTTCACAACAATACCCTCTCCGGGAATGTACCTTCCGCTCTGAAGAGACTAGAAGATGGATTTGTGTATGAATACAATGTGGGGTTATGTGGAGATGGGTTTTCATCCTTGAAATCTTGTAGCGCTTCAAATCATGCCAATCCCAACAGACCTGAACCCTATGGGGCAGGAGTTGATGGTTTATCAAGAGATATCCCAGAAACTGCAAATGTAAAGTTGCCTTGCAATGGAACTAAGTGCCAAAGTTCATCAAATTCCAAGCACGCAACATCTGTTACAATCGGCATAGTTCTGGCTATGATTGCTGTATCAGCAGTTGGTATTCTGACCTTCACAATTTATCGTCGCCGGAAACAAAAGCTTGGAAATGCTTTTGATATCTCCGAGAGCCGCCTAAGTACTGATCAAACAAAGGGTATATACAGGAAAAATGGTTCTCCTTTGGTCAGCCTTGAGTACTCTAATGGATGGGACCCTTTGGCTGATAGCAGGAATTTCAATGGAGATAGCCAAGATATGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCAGAGTTGAATTTGTTGGGTAAGAGTAGCTTTAGTGCAACATACAAAGGAGTTCTAAGAGATGGATCTGTTGTTGCTATTAAGAGCATCAGTAAAACTAGTTGCAAATCAGATGAAGCTGAATTCTTGAAGGGATTGGACATTTTGACCTCACTGAGGAATGAGAACTTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTCCTGGTTTATGATTTTGTTTCTAATGGAAACCTGTCGCGGTACCTTGATGTGAAGGAGGGTAGTGGAGAAGTCCTGGAATGGTCAACTAGAGTTTCTATTGTCAAAGGCATTGCTAAAGGTATAGCATATTTACATGCATACAAAGCAAACAAACCCGCTCTTGTTCACCAAAACATATCAGCTGTGACAGTGCTCATCGATCAGCGCTACAACCCCTTGCTTTCGGATTCTGGCCTGTACAAGCTTCTCACTAATGACATTGTCTTCTCTGCGCTAAAAGCGAGTGCAGCAAAGGGTTATCTGGCTCCTGAATACACAACTACAGGTAGGTTCACAGAGAAAAGTGATGTTTATGCTTTCGGGGTGCTTCTTTTCCAGATCCTCACAGGGAAGCAGAAGATCACTAGCTCGATGCGCCTTGCCGCAGAATCCCTCAGATTCCAAGAACTTATTGACCCGAATCTGCATGGTAGATTCTTTGAATACGAGGCGGCTAAACTCACGAGGATGGCTTTGCTTTGCTCCCACGAGTCTCCTTTTGAGAGGCCAACCATGGAAGCCATTGTTCAAGAATTGGGCAATTGTAGTAGCTGTCTCTGA 2064 0.4409 MGCSVTVTSVLLVTLFFSLLLVLKPTCVRGNDELRALLDLKATLDPDSTYLSSWTINGNPCGGSFEGVACNEKGQVANVSLQGKGLSGKLSPSISGLKHLTGLYLHYNSLYGDIPREIANLTQLSDLYLNVNHLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQLGDLKKLSVLALQSNQLTGAIPASLGDLGMMMRLDLSSNHLFGSIPSRLADVPSLQVLDVHNNTLSGNVPSALKRLEDGFVYEYNVGLCGDGFSSLKSCSASNHANPNRPEPYGAGVDGLSRDIPETANVKLPCNGTKCQSSSNSKHATSVTIGIVLAMIAVSAVGILTFTIYRRRKQKLGNAFDISESRLSTDQTKGIYRKNGSPLVSLEYSNGWDPLADSRNFNGDSQDMFQSFRFNLEEVESATQYFSELNLLGKSSFSATYKGVLRDGSVVAIKSISKTSCKSDEAEFLKGLDILTSLRNENLVRLRGFCCSRGRGECFLVYDFVSNGNLSRYLDVKEGSGEVLEWSTRVSIVKGIAKGIAYLHAYKANKPALVHQNISAVTVLIDQRYNPLLSDSGLYKLLTNDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKQKITSSMRLAAESLRFQELIDPNLHGRFFEYEAAKLTRMALLCSHESPFERPTMEAIVQELGNCSSCL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3178 687 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 685 - -
Dod02g3178 687 Pfam Protein tyrosine and serine/threonine kinase 419 680 IPR001245 GO:0004672|GO:0006468
Dod02g3178 687 Gene3D Ribonuclease Inhibitor 181 246 IPR032675 -
Dod02g3178 687 Gene3D Phosphorylase Kinase; domain 1 385 493 - -
Dod02g3178 687 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 10 685 - -
Dod02g3178 687 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Dod02g3178 687 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Dod02g3178 687 SUPERFAMILY L domain-like 31 240 - -
Dod02g3178 687 Gene3D Transferase(Phosphotransferase) domain 1 494 686 - -
Dod02g3178 687 Gene3D Ribonuclease Inhibitor 30 180 IPR032675 -
Dod02g3178 687 SUPERFAMILY Protein kinase-like (PK-like) 391 680 IPR011009 -
Dod02g3178 687 ProSiteProfiles Protein kinase domain profile. 415 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3178 Dod-Chr2 66758664 66762670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3178 12 528 Miscellaneous Gene Families AT4G22730 55.827 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dod02g3178 PK_Tyr_Ser-Thr 1.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3178 - - gmx:100789253 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3178 02 66758664 66762670 Dod06g1487 06 19917641 19920013 PCT