Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3136 ATGCCGTCCAGGCAACTCCCGTTACCGCCGCCATCCACGGCGGACTTTCCAACACTAACACCCCTTCACCACCGCCGCCACCACCACCACCACCACCGCCTCGTCGCCACTCTCATCGCCGCCACCGCCGCCACATCCCTTCTCCTCTTTCTCCTCTTCCTCCGCCGCACCCTCCGCCGTAAGCCCACCGCCTCCTCCTCCACCTCCGCCGCCGCAGAAGACTCCAAGCCGCCCCACCGCCTCTCGTACTCCATCCTCCGCCGCGCCACAAACTCCTTCTCTTCCCCACTCGGCCACGGCGGCTTCGGCACCGTGTTCTCCGGCACCCTCCCGTCGCCGGCGAGAACCCCGGTCGCCGTCAAGCTCATGGACCCCACCACCACCACCTCCCAACAACAGGGCGAGCGCGAGTTCCACAACGAACTCTTCTTCGCCTCCGTGCTTCACCGCTCCCCCCACGTCGTCGCCGCCGTGGGGTTCTCCTCCGACCCGAAACGGCGCCGTTTCCTCCTCGTTTACGACCTCATGGTCAATGGAAACCTCCAAGACGCTCTTTTGCACAGAAAGTGCCCCGAACTCATGCAATGGAACAAGCGCTTCTCTGTTGCATTGGACGTGGCAAAGGGTCTTCTTTACCTTCACAGTTGTGAACCCCCTGTGATCCATGGTGACATTAAGCCTAGTAATATTCTCCTTGATGGTGATTTCTCAGCAAAAATCGGGGATTTTGGGCTTGCCCGTTTAAAATCAGAGACCCATTTGGATGTTTTGGATGATGGCGATGGTAATGAGAAGAAAAAGGACGGGTTTTTGGAGTGTAATGGTGGTGGGGTGGTTGATGATTGTGAGACTGAGAGTGTAAACACTGCTGGTTTCTTTGAGGAGGGTAGCTTGTGTGCGGATCAGTCTCCTGAAGGTTTTGTTAGGATGCCGGTGTTGGAGACCTCGCCTGAGACTAATGGGGTTGCGGTGGCCTCGCCAGACACTAAGGCTAGCAGTGTTCAGAGTGAGAGGGATGTTGGTGTTAAGAAGAATGGGAAAGGGATGAGGAGTAATTCAGTGAGGGATTGGTGGTGGAAGCAAGACAATGAGGTTGCAGGTGCAGCATCAGGATCAGGGTCTGTTCCTGTTGGGGAGAGTAAGAAGGTGAAGGATTATGTCATGGAGTGGATTGGGAAGGAGGTGGATAAGGAAAGGCCTAAGGGCGAATTGGTTGGAGAAGATGGGAAATTGGGGGAGCCACAAAAGGTGAAGAAGAAGAAGAAGAAGAGCAGGAAGCACCAATTGGAATGGTGGGAGTCAATGGAGGAGGGGAAGTTTGATGAGATTGTGAAGAAGGAGAAGAGGAGGACGGCGAGGGAGTGGTGGAAGGAGGAGTTCAGTGAAGAGCTTTCAAGGAAGAAGAAGAAGAAGAGAAAGGGATTGAACAGTGACGATGAAAATGGCAGTGAGTGGTGGGTGAGTGATGATGCTTTGTATGGGGATAAGAACAAGGCCAAGAGGAGAAGCAGGAATAACTGTAGAGGTGTGGATTGGTGGTTGGATGGGCTCAGTGGTGATTTATGGAGAGCTCGAAGGAACAGCTATGATTCTGCTAGTGGAGAAATTCCAAAGAGTGGTGGTGTTAGTAGCACTCCAAGTATGAGGGGAACCGTTTGTTACGTTGCTCCTGAGTATTGCTATGGTGGAGATGTCTCAGAGAAGTGTGATGTATATAGTTTTGGGGTCTTGTTGCTTGTTATCATTTCTGGGAGGCGCCCACTTCAGGTGAATGGTTCGCCATTGTCTGAGTTTCACCGCGCAAATCTTTTGTCTTGGGCACGACATTGTGCCAGAAATGGGAAGCTCATTGAGCTGGTTGATCAGTCTATTGAGTCACTGGATAAAGATCAGGCTCTTCTCTGTATCAAGGTAGCTTTGCTTTGTTTGCTTAAGTCCCCTACTCGCCGTCCTTCAATGAAGGAAGTTGTTGGATTGCTTACCGGGGAATTGGAGCCACCCCAATTGCCTGTTGAGTACTCACCTTCAACCCCTTCTCGCTTCCCATTCAAGTCTCGAAAGAAAGGCCGGTGA 2073 0.5282 MPSRQLPLPPPSTADFPTLTPLHHRRHHHHHHRLVATLIAATAATSLLLFLLFLRRTLRRKPTASSSTSAAAEDSKPPHRLSYSILRRATNSFSSPLGHGGFGTVFSGTLPSPARTPVAVKLMDPTTTTSQQQGEREFHNELFFASVLHRSPHVVAAVGFSSDPKRRRFLLVYDLMVNGNLQDALLHRKCPELMQWNKRFSVALDVAKGLLYLHSCEPPVIHGDIKPSNILLDGDFSAKIGDFGLARLKSETHLDVLDDGDGNEKKKDGFLECNGGGVVDDCETESVNTAGFFEEGSLCADQSPEGFVRMPVLETSPETNGVAVASPDTKASSVQSERDVGVKKNGKGMRSNSVRDWWWKQDNEVAGAASGSGSVPVGESKKVKDYVMEWIGKEVDKERPKGELVGEDGKLGEPQKVKKKKKKSRKHQLEWWESMEEGKFDEIVKKEKRRTAREWWKEEFSEELSRKKKKKRKGLNSDDENGSEWWVSDDALYGDKNKAKRRSRNNCRGVDWWLDGLSGDLWRARRNSYDSASGEIPKSGGVSSTPSMRGTVCYVAPEYCYGGDVSEKCDVYSFGVLLLVIISGRRPLQVNGSPLSEFHRANLLSWARHCARNGKLIELVDQSIESLDKDQALLCIKVALLCLLKSPTRRPSMKEVVGLLTGELEPPQLPVEYSPSTPSRFPFKSRKKGR* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3136 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Dod02g3136 690 Pfam Protein tyrosine and serine/threonine kinase 546 658 IPR001245 GO:0004672|GO:0006468
Dod02g3136 690 Pfam Protein tyrosine and serine/threonine kinase 94 251 IPR001245 GO:0004672|GO:0006468
Dod02g3136 690 MobiDBLite consensus disorder prediction 319 339 - -
Dod02g3136 690 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 690 - -
Dod02g3136 690 MobiDBLite consensus disorder prediction 401 415 - -
Dod02g3136 690 MobiDBLite consensus disorder prediction 666 690 - -
Dod02g3136 690 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Dod02g3136 690 MobiDBLite consensus disorder prediction 401 424 - -
Dod02g3136 690 PANTHER OS07G0586332 PROTEIN 1 690 IPR044576 -
Dod02g3136 690 MobiDBLite consensus disorder prediction 1 16 - -
Dod02g3136 690 Gene3D Transferase(Phosphotransferase) domain 1 524 666 - -
Dod02g3136 690 MobiDBLite consensus disorder prediction 318 348 - -
Dod02g3136 690 MobiDBLite consensus disorder prediction 1 24 - -
Dod02g3136 690 ProSitePatterns Protein kinases ATP-binding region signature. 97 121 IPR017441 GO:0005524
Dod02g3136 690 ProSiteProfiles Protein kinase domain profile. 91 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3136 690 SMART serkin_6 91 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3136 690 SUPERFAMILY Protein kinase-like (PK-like) 73 678 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3136 Dod-Chr2 66293975 66296901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3136 533 657 Receptor kinase-like Gene Family AT2G04300 26.984 2.52e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Dod02g3136 PK_Tyr_Ser-Thr 8.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3136 - - lja:Lj2g3v0473820.1 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3136 02 66293975 66296901 Dod02g3136 02 66293975 66296901 ECH
Dod02g3136 02 66293975 66296901 Dod06g0708 06 8540863 8541378 PCT