Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3115 ATGTCACAGCGTGAGGGTGAGAGAAGTGAAGATGGAGAGATCAACATGGCTGCTTGGATTCTTGGTGTCAAAAATCTTGCAATTCAACCATACTCTCTTCCTTCTTTAGGTCCCTATGATGTCAAAATTAGAATTAAAGCTGTTGGTATTTGTGGAAGTGATGTTCACTATTATAAGACAATGAGATGTGCCAATTTTATTGCCAACAAACCCATGGTCCTGGGGCATGAGTGTGCTGGAATCATAGAAGAAGTTGGAACTGAAGCTAAATCTCTTGCGGTAGGGGACAGGGTGGCTTTAGAGCCTGGAATCAGTTGCAAAAGGTGCAATCTCTGCAAAGATGGCCGCTACAATCTTTGTCGCCAGATGATATTTTTTGGGTCTGCATCAACTAACGGTTCTCTTGCCAACAATGTGGTGCATCCAGCCAATCTATGCTTCAAGCTACCTGACAATGTGAGCTTGGAGGAAGGAGCCATGATTGAACCACTTAGTGTTGGAGTACATGCATGTCGCCGCGCAAATATTGGTCGAGACACAAATGTGTTGATCATAGGAGCAGGAACCATAGGCCTTGTTGTATCGCTTGCTGCCCGTGCATTTGGAGCACCAAGAATTGTCATTGTTGATGTAGATGAACGCCGTTTATCAATTGCAAAGAATCTTGGTGCAGATGAGACTATTCAAGTTTCGAATAGTATCCAGGACATGGAGAAAGAAGTGGTGCAAATCCAAAATGTGATGGGTTCTGGAATTGATGTCAGTTTTGATTGTGTGGGGTACAACAAAACCATGTCCACAGCCCTGAATGCCACTAGCTCTGGGGGCAAAGTTTGCCTCATCGGATTAGCCCAAACTGAGATGACAGTTCCCCTTACTACAGCAGCTGTTAGGGAGATTGATGTAATTGGCGTATTCAGATACAGGAACACTTGGCCCCTTTGCATTGAGCTATTGCGCACTGGCAAGATTGACATCAAGCCACTGATTACTCACAGGTTTGGATTCTCACAGAAAGAGGTGGAACAAGCCTTTGAAACCAGTGCTCAAGGGGGTAATGCTATTAAGGTCATGTTCAATCTGTAG 1086 0.4448 MSQREGERSEDGEINMAAWILGVKNLAIQPYSLPSLGPYDVKIRIKAVGICGSDVHYYKTMRCANFIANKPMVLGHECAGIIEEVGTEAKSLAVGDRVALEPGISCKRCNLCKDGRYNLCRQMIFFGSASTNGSLANNVVHPANLCFKLPDNVSLEEGAMIEPLSVGVHACRRANIGRDTNVLIIGAGTIGLVVSLAARAFGAPRIVIVDVDERRLSIAKNLGADETIQVSNSIQDMEKEVVQIQNVMGSGIDVSFDCVGYNKTMSTALNATSSGGKVCLIGLAQTEMTVPLTTAAVREIDVIGVFRYRNTWPLCIELLRTGKIDIKPLITHRFGFSQKEVEQAFETSAQGGNAIKVMFNL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3115 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Dod02g3115 361 Pfam Zinc-binding dehydrogenase 190 319 IPR013149 -
Dod02g3115 361 PANTHER SORBITOL DEHYDROGENASE 9 361 - -
Dod02g3115 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 152 325 IPR036291 -
Dod02g3115 361 Gene3D - 166 306 - -
Dod02g3115 361 CDD sorbitol_DH 17 360 IPR045306 GO:0016616
Dod02g3115 361 Pfam Alcohol dehydrogenase GroES-like domain 40 149 IPR013154 -
Dod02g3115 361 Gene3D - 25 348 - -
Dod02g3115 361 PANTHER L-IDONATE 5-DEHYDROGENASE 9 361 - -
Dod02g3115 361 SMART PKS_ER_names_mod 22 359 IPR020843 GO:0016491
Dod02g3115 361 SUPERFAMILY GroES-like 16 188 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3115 Dod-Chr2 65935484 65938668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3115 28 292 Monolignol Biosynthesis Gene Families AT4G37980 25.632 1.08e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3115 K00008 K19635 pop:7481618 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3115 02 65935484 65938668 Dod02g3115 02 65935484 65938668 ECH