Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3112 ATGGGTGTTGCCAAGAGGAATACCATCAGTGAACCATGTACTTTATACAATTGTTACAAAGTAGCAGGCTTGGCCGAAACCATATTAGACACAAATCATACCTCTAATTTGAAAGAACGATACATTCTTGGGGAGCAGTTGGGTTTGGGACAATTTGGTGTCATCAGAGCCTGCTCTGATAAGCTGACAGGAGAGGCTCTGGCCTGCAAATCAATTGCTAAACATAGCTTGGTTACTTTGGAGGATCTGAGGAGTGTCAAACTTGAGATTGAGATCATGGCTAGGCTATCTGGGCACCCGAACGTCGTGGATCTCAAGGCGGTTTATGAAGAGGAAGATTTTGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTGTTTCACCGGTTGGAGAAGCATGGACGGTTTTCGGAATCCGAAGCCAGGGTTCTCTTTAGGCACCTAATGCAGGTGGTTTTGTATTGTCATGAAAATGGCGTTGTTCATAGAGATTTGAAGCCTGAGAATATTCTCTTAGCTACAAGAGCATCCTCATCTCCAATCAAGTTGGCCGATTTTGGGCTTGCAACCTACATCAAGCCTGGACAAAGCTTGCATGGGTTAGTTGGGAGTCCATTCTATATAGCTCCAGAGGTACTGGCGGGCGCATATAATCAGGCTGCTGATGTTTGGAGTGCAGGGGTTATTCTTTACATTCTATTGAGTGGGATGCCTCCATTTTGGGGGAAGACCAAGTCGCGGATATTCGACGCTGTTAAGGCCGCTTCCCTGAGGTTCCCGTTGGAACCTTGGAATTGCATATCCGAATCAGCGAAGGATTTGATCAAGGGAATGCTCTGTACAGAACCTTCTCGGAGGCTCACTGCCCAAGAGGTTTTAGATCATTGCTGGATGGAAAGCAATCTCACAAATCCTGAACAACTAAGTGAACATAAAACCCAAAGTTGGGAAGAATGGGATGTTGGTGGCAGCTCATTCTCTGCCTCTTTTATGTCCAGGAATCAGGATATCAGCTTTGGTGCAGGATCACCAACTTGTGATGCTCAATCACCTACATTCACCTGCAGATCATCATTTTCGTCTTTTATTGTGGAACCGGAGACTCCTTGTTTGGTTTCTGGTGGGTTTTCATTTCAGAGCACCAAAGATTCCAATGGGTTGGAATTTCCTTCTCCTGTACCCTCAATACTCAGCTTTTCATTTCTTAGTCCCAGTTCTGTTGTTGAGCAAGAGAGTTGTAAATTAGAGTGCTCTACTAACACAGCCGATGTTAATGCAATCACTGGAGAAGCAAGCTTGGGAGAGTTGCTTCTACTACCGGATTCTCCCCCTTGCATCGGACACAATGTTAAAGAATTGGTCCGCAAGCCGGTAGAGACTAAAAGGGCAGGTGGAGTGAATGGACATAGGATGTTGGGAATCCACAGCAAGAGAAACCGGACAATCGGACTCGGCGACTGTGAGCAACTAGACCTTGTGGTGACTGAATCAGTCATCCGGTGGTCATCGTTCACGCAACTCCCTACATCTTTGAGATCATCTCTTGTCTGCTAA 1557 0.4605 MGVAKRNTISEPCTLYNCYKVAGLAETILDTNHTSNLKERYILGEQLGLGQFGVIRACSDKLTGEALACKSIAKHSLVTLEDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHRLEKHGRFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFDAVKAASLRFPLEPWNCISESAKDLIKGMLCTEPSRRLTAQEVLDHCWMESNLTNPEQLSEHKTQSWEEWDVGGSSFSASFMSRNQDISFGAGSPTCDAQSPTFTCRSSFSSFIVEPETPCLVSGGFSFQSTKDSNGLEFPSPVPSILSFSFLSPSSVVEQESCKLECSTNTADVNAITGEASLGELLLLPDSPPCIGHNVKELVRKPVETKRAGGVNGHRMLGIHSKRNRTIGLGDCEQLDLVVTESVIRWSSFTQLPTSLRSSLVC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3112 518 SUPERFAMILY Protein kinase-like (PK-like) 39 363 IPR011009 -
Dod02g3112 518 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Dod02g3112 518 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3112 518 CDD STKc_CAMK 40 298 - -
Dod02g3112 518 Gene3D Transferase(Phosphotransferase) domain 1 128 325 - -
Dod02g3112 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Dod02g3112 518 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3112 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 511 - -
Dod02g3112 518 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3112 518 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 511 - -
Dod02g3112 518 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3112 Dod-Chr2 65917447 65921319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3112 34 308 EF-hand Containing Proteins AT2G17290 52.000 9.28e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod02g3112 Pkinase 5.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3112 - - gmx:100776088 864.374