Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3110 ATGGCCTCTGCAACACTCTCTCTCTGTCACTGTCACTGTCACCCTCTTCCTCTTCCTTTTCCTTCTCCTTATTCTTCTTCCCTCGTCAGAACTCTGAAACCAACAACGCTTTCTCGCTCTTCTTCTCTCTCACCCTTTCCCTTCTTCCTCTCTTCTTCCGCAAAATTGCCACTACCTTCACAATCATCATCCAGCACTAACCCACCACCACGTGCCTACGTCACGGGACCCGCCTCCGACCCGATATTCGCCGACCCAGATCCGAAGCTTGATGGGTCGGGTCCCGACCCGCCGAGAGTGATAAGCTGGGGCCTGCTTTGGACGCTGCTGATGAAGCACCACAAGCTGAGGCTCTCTCTTTCCCTTGCAACTCTCCTTGCCTGCACCACCTGTACTCTTTCCATGCCCATTTTCTCTGGGCGGTTTTTTGAAGTTCTTATTGGTGCAAGACCAGAGCCACTGTGGAGGTTGCTCAGCAAAATTGGAGTCCTGTATGCACTGGAGCCACTTTTAACCGTTATTTTTGTTGTAAACATGAACACAGTGTGGGAAAAAGTTATGTCAACTCTTAGAGCTCAGATCTTTGGTAGAATATTGATTCAGAAGGTTGAATTTTTTGACAAATACAAGGTTGGTGAACTCACTGGTTTGTTAACATCTGATTTGGGTTCTCTTAAAGATATCGTGAGTGAGAATGTCTCAAGGGATCGCGGTTTCAGGGCATTATCTGAGGTCATTGGGACAATATTCATACTTTTTTCTTTATCCCCTCAATTAGCACCAATTCTGGGTGTTCTGATGCTCACAGTTTCCATATCAGTTGCTGTCTACAAGAGATCAACATTCCCTGTTTTTAAAGCACATGGGTTGGCCCAAGCTTCAATATCTGATTGTGTATCTGAAACATTTTCTGCTATTCGAACAGTAAGAATCTTTGGTGGTGAAAAGCGCCAAATGTTTACATTTGCTAACCAGGTTTTATCTTTCCAGTCAAGTGGGATAAAGCTTGGTACTTTCAAATCATTGAATGAATCCATGACTAGGGTTGCTGTTTATATTTCTCTGATTGCATTATATTGTCTTGGTGGGAACAAAGTTAAGGCGGGTAAGCTCTCAGTTGGAGCTATGGCATCTTTTATTGGATATACTTTTACTTTAACATTTGCGGTTCAAGGAGTGGTTAATACTTTTGGAGATCTTCGTGGAACTTTTGCTGCTGTTGACAGGATCAACTCTGTTTTGTCTGGAGTTCAAGTTGATGATGCCCTTGCTTATGGCTTAGAAAGAGAACTGAAACAAAAAGCAGTGGATGAAGGGAACTATAGGTTGTTCTTTTCCGATCATTCCACTGAGAAAAACCAAAAAAATTATTTGCATTACATGTCAGCACTGAAAACATCAAGCAATTTGTTTAGCTTGACTTGGTCCGGAGATGTTTGTCTTGAAGATGTGTATTTCTCTTATCCTTTAAGACCAGATGTGGAAATCTTACGTGGTTTAAGTTTAAGACTAAAATGTGGAACTGTAACTGCACTCGTGGGTCCTAGTGGTGCAGGCAAAAGTACGATAGTACAGCTATTGGCTCGTTTTTATGAGCCAGCAAGAGGTTGTATAACAGTTGCAGGAGAGGATGTCAGAACATTTGACAAGAGTGAATGGGCTCGGGTTCTGTCTATTGTAAATCAAGAGCCTGTTCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCGTATGGGCTTCCGGATGACAATGTTTCTAAAGAGGATGTGATTACGGCAGCAAAGGCTGCAAATGCTCATGACTTTATAATTTCACTTCCACAGGGCTATGATACACTAGTCGGTGAGCGTGGAGGCTTACTGAGTGGAGGACAGCGGCAGGTACACTGGAGTTAA 1893 0.4332 MASATLSLCHCHCHPLPLPFPSPYSSSLVRTLKPTTLSRSSSLSPFPFFLSSSAKLPLPSQSSSSTNPPPRAYVTGPASDPIFADPDPKLDGSGPDPPRVISWGLLWTLLMKHHKLRLSLSLATLLACTTCTLSMPIFSGRFFEVLIGARPEPLWRLLSKIGVLYALEPLLTVIFVVNMNTVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPILGVLMLTVSISVAVYKRSTFPVFKAHGLAQASISDCVSETFSAIRTVRIFGGEKRQMFTFANQVLSFQSSGIKLGTFKSLNESMTRVAVYISLIALYCLGGNKVKAGKLSVGAMASFIGYTFTLTFAVQGVVNTFGDLRGTFAAVDRINSVLSGVQVDDALAYGLERELKQKAVDEGNYRLFFSDHSTEKNQKNYLHYMSALKTSSNLFSLTWSGDVCLEDVYFSYPLRPDVEILRGLSLRLKCGTVTALVGPSGAGKSTIVQLLARFYEPARGCITVAGEDVRTFDKSEWARVLSIVNQEPVLFSVSVGENIAYGLPDDNVSKEDVITAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQVHWS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3110 630 Pfam ABC transporter 497 626 IPR003439 GO:0005524
Dod02g3110 630 Pfam ABC transporter transmembrane region 120 389 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g3110 630 Gene3D - 475 626 IPR027417 -
Dod02g3110 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 470 626 IPR027417 -
Dod02g3110 630 Gene3D ABC transporter type 1, transmembrane domain 98 416 IPR036640 GO:0005524|GO:0016021
Dod02g3110 630 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 120 402 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g3110 630 CDD ABC_6TM_TAP_ABCB8_10_like 128 410 - -
Dod02g3110 630 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 64 626 IPR039421 -
Dod02g3110 630 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 64 626 - -
Dod02g3110 630 SUPERFAMILY ABC transporter transmembrane region 106 410 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3110 Dod-Chr2 65903568 65909611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3110 134 626 Calmodulin-binding Proteins AT2G36910 28.682 2.94e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3110 K05657 - gmx:100791034 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3110 02 65903568 65909611 Dod02g3110 02 65903568 65909611 ECH