Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3105 ATGTTTACCTTCAATCACTTTTCAAACGCACGTTCCATATCTTCGGAACCTTCCTCTTCCTTTGACACGTCATCACCAGTGTCTGAAGTAAGCAGTGGTGGCGGCGTCGGCGGCGTTCGTGGGTTGGCGGCATTCTCCGATGAGGATTTGCTGCTGGCGGCGAGCCACCCGAAGAAGCGTGCGGGGAGGAAGAAGTTCAAGGAGACTCGCCACCCGGTGTATAGGGGTGTGAGGAGGAGGAACACGGATAAGTGGGTGAGTGAAGTGAGGGAGCCAAAGAAGAAGACAAGGATTTGGCTGGGGACTTTTCCCACTGCAGAGATGGCGGCGCGTGCCCATGATGTGGCGGCGTTGGCCTTGAGAGGCCGGTATGCTTGCCTTAACTTTGCGGACTCTGCGTGGCGGTTACCTGTTCCCGCCACGCCTGATGCCAAGGCCATCCAGAAGGCTGCTGCAGAGGCTGCAGAGGCCTTCCGGCCTGGAATGGCCTTGGAGACTAGTGACACGAGGGAAGAGGACAGCGGAACGACGGTGATGGCTAGGGAGGAGCAGGGTATGTTTTGTATGGAGGAAGAAGAGGAGGCAGTGTTGGACATGCCAGAATTGTTGAGGAACATGGTGATCATGTCCCCAGCACACAGCATAGGGTATGAGTATGAATATGCTGACGTGGACGCTCATGATGCTGAGGTGTCATTATGGAGTTTCTCAATTTAG 717 0.5523 MFTFNHFSNARSISSEPSSSFDTSSPVSEVSSGGGVGGVRGLAAFSDEDLLLAASHPKKRAGRKKFKETRHPVYRGVRRRNTDKWVSEVREPKKKTRIWLGTFPTAEMAARAHDVAALALRGRYACLNFADSAWRLPVPATPDAKAIQKAAAEAAEAFRPGMALETSDTREEDSGTTVMAREEQGMFCMEEEEEAVLDMPELLRNMVIMSPAHSIGYEYEYADVDAHDAEVSLWSFSI* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3105 238 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 238 - -
Dod02g3105 238 MobiDBLite consensus disorder prediction 1 31 - -
Dod02g3105 238 CDD AP2 74 132 IPR001471 GO:0003700|GO:0006355
Dod02g3105 238 Pfam AP2 domain 72 122 IPR001471 GO:0003700|GO:0006355
Dod02g3105 238 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Dod02g3105 238 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 238 IPR045277 GO:0003700
Dod02g3105 238 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Dod02g3105 238 MobiDBLite consensus disorder prediction 1 33 - -
Dod02g3105 238 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Dod02g3105 238 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Dod02g3105 238 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Dod02g3105 238 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3105 Dod-Chr2 65861889 65863360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3105 28 236 AP2-EREBP Transcription Factor Family AT4G25470 55.093 5.87e-67 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g3105 AP2 5.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3105 - - adu:107491210 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3105 02 65861889 65863360 Dod06g0736 06 8902785 8906103 ECH
Dod02g3105 02 65861889 65863360 Dod02g3105 02 65861889 65863360 ECH
Dod02g3105 02 65861889 65863360 Dod06g0736 06 8902785 8906103 PCT