Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3104 ATGGCTTGGGGTGAGAGCTCACTTGATATCTCTATTTTGGTTGTGGATGATGATGATACTTCTCTGACCATTGCTGCTAATATACTCAGCTCATGGGAATATAAAGTTCTCACTGCCAACAGTGCCCCCAGTGCTTTGAAAACACTTCGAGAGTTTGAAGGCTTTTTCGATCTCGTTATCACCGAACTTCATATATCAGGAGTGAATGGATTTGAATTTCAAAGGCGTGTTAGAGACGAATTTCAGCTACCTGTAGTAATGATGTCCGCAGACAAAAGGAAGAGTGTCATGTCCAAGAGCTTAGAGAACGGTGCAGCACATTTTGTGCTGAAACCCATTTGTGCTGATGATTTCAAAGACATATGGCAGTATGCAAGGAAAGAGAAACCAGTCACTGGTGCTGAAGAATTGACAATAAAAGATAATCAAGGTGCTGAATCACCACCATCTGGTGATGATGAGAAGGTTATGTCTCAAGATGCAAACTCTACAGCAGCAGTGGCAGCATCATCAGTGAGTTCTGAGCCTAAGCAAAAGAGAAAATATAAGAAGAGAATTTGGAGTCAAATGAATAATAATCATAAGGAAGACCACAGTGAAGGACCCACAAAAAGGTCCAAGATTGTGTGGACAACACACCTTCACAACCTGTTTCTGATGGCCATAAAACAAATTGGATTGGATAAGGCGGTGCCGAAGAAAATTCTTGAGATCATGAATGTGCCGAACTTGACAAGAGAAAATGTCGCTAGTCACTTACAGAAGTACCGCATCTTTCTGAGGAAAGTTGCAGATAGAGGACTCATTGAGGGCATATCTGACAGGGCACTAAGGTCAAGGTTTGCTTCTGAGCTTCCAGTGTCAGTGATCAGAGACATCAAAACAAGAACTGGGAAACTCAAACTTCCTCTGCAGAGATATCTGAAAGGTCAAGGAGGTCCAACAATAAAAGATCTTCATGTTTCACAAGCTTCCAACAATAATAGTGCCTATGGGAATAGTACTACCCAACTTGGAAGAGGAGAACAATTCCCCTATCTATTGCAAGGTGGTGGGAAGATGCTTCAAAATCAGCAAGCTATTAATGATCTCTATAGTAATGCCTTGAAACAAGTGAGGCTTGGAAAATCAACCTTTGGAAGCAGATTGATTGGGGCCAATAATCATGTCCTTGGAGAAAACATGTTGGGAAGCAATGGAGCTTCAGTTTTTGATCAACCAAAGAGCTCTTACAATGCTGGTCCTGTGTTTCCAGCATATGGAATGGGACATGGCTTGTTGACTAGTTCAAATGCTCTCACAGGAGGTTTTAAATTTGGTGGCACAATGCAAAACCAAAACAATGGCTCATTGGGGAATCAAAGCTTATTAAGCTATGGCCTTGGAAATAACAAAATGGCCTCTTTGGGCAACTCTAATCTGCCACTGCCCTTGAGTTCTTCTTCTGGTTGTTACCCCAGCAGTGTTTCCTCTGGGATTCAACTGAATGGTGGTGGAACACAATTGAATGGGTCTGGTCTGAATGGAGGGTTTAATAACAGTGTTGGTATAACAAGGGCTATTCCCACCGATAATAATAGCTTTGGACTGCTGAATGGAAGCTATGGAACTCAAAATGCAAATATGAATGTGAAACCCTTGGCCTTGGGGCAAGGAAATTCTGGTTTGGTTCAAGGATGTTATGCTTCTCCTCCTGCTAAGGATGTGTATGCAAATGCAAGTGAGCTTGCTGCAGCAACTTTGGTAACTAATGTAACTCCACAAGGAAATGCTTCAGGGATTCAACAATTGCCTCAGCAACTAGATGGCATAACTTGGAATGCTGCAGGAAATGAGTATCAGTTTGATGCAAGTTCAAACACTGAAGGCCTGGCTAGCCAAGTGGAAGATGACCTTTTTAAGCTTTTCTTGACTCTAGATGACATGCAGCTTCTCAATGAGGCTTGGGATATGGAACTTTTTGAAGCCGTGTTCGGGAATAGGGCAAACTAA 1992 0.4222 MAWGESSLDISILVVDDDDTSLTIAANILSSWEYKVLTANSAPSALKTLREFEGFFDLVITELHISGVNGFEFQRRVRDEFQLPVVMMSADKRKSVMSKSLENGAAHFVLKPICADDFKDIWQYARKEKPVTGAEELTIKDNQGAESPPSGDDEKVMSQDANSTAAVAASSVSSEPKQKRKYKKRIWSQMNNNHKEDHSEGPTKRSKIVWTTHLHNLFLMAIKQIGLDKAVPKKILEIMNVPNLTRENVASHLQKYRIFLRKVADRGLIEGISDRALRSRFASELPVSVIRDIKTRTGKLKLPLQRYLKGQGGPTIKDLHVSQASNNNSAYGNSTTQLGRGEQFPYLLQGGGKMLQNQQAINDLYSNALKQVRLGKSTFGSRLIGANNHVLGENMLGSNGASVFDQPKSSYNAGPVFPAYGMGHGLLTSSNALTGGFKFGGTMQNQNNGSLGNQSLLSYGLGNNKMASLGNSNLPLPLSSSSGCYPSSVSSGIQLNGGGTQLNGSGLNGGFNNSVGITRAIPTDNNSFGLLNGSYGTQNANMNVKPLALGQGNSGLVQGCYASPPAKDVYANASELAAATLVTNVTPQGNASGIQQLPQQLDGITWNAAGNEYQFDASSNTEGLASQVEDDLFKLFLTLDDMQLLNEAWDMELFEAVFGNRAN* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3104 663 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
Dod02g3104 663 Pfam Response regulator receiver domain 12 119 IPR001789 GO:0000160
Dod02g3104 663 MobiDBLite consensus disorder prediction 156 175 - -
Dod02g3104 663 Gene3D - 11 204 - -
Dod02g3104 663 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 551 IPR045279 GO:0009736
Dod02g3104 663 MobiDBLite consensus disorder prediction 135 183 - -
Dod02g3104 663 Pfam Myb-like DNA-binding domain 210 257 IPR001005 -
Dod02g3104 663 Gene3D - 205 264 - -
Dod02g3104 663 PANTHER RESPONSE REGULATOR 23-RELATED 10 551 - -
Dod02g3104 663 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 206 258 IPR006447 GO:0003677
Dod02g3104 663 SUPERFAMILY Homeodomain-like 204 262 IPR009057 -
Dod02g3104 663 SUPERFAMILY CheY-like 10 128 IPR011006 -
Dod02g3104 663 CDD REC_typeB_ARR-like 12 125 - -
Dod02g3104 663 SMART REC_2 10 122 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3104 Dod-Chr2 65839991 65848228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3104 6 281 Response Regulator Gene Family AT5G07210 39.249 2.23e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod02g3104 Response_reg 1.5e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3104 - K14491 aprc:113866677 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3104 02 65839991 65848228 Dod02g3104 02 65839991 65848228 ECH