Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3103 ATGAATCTACAACCACCCCGACGAAAAGCTTGTCCAGCTTGCAAATACCAAAGACGAAGATGCAGTCCAGATTGCATCTTTGCCCTCCACTTCCCTGATGATCCTGTTGTCTATGCTGACATTGACAAGTTATTTGGTCGTGCAACTGCTGAAAGATTGTTTCAGCGAGCCGAACCTGAGTTACAAGAAGATTTAGTAAAATCAATATGTTGGGAAGCTCGAATGTGGAGAAGACAATCGCCTTTTATCGGTTGCTTAGGTTATATGAACTGGCTTGAAGAACAAATCACAAAAACAAGCATAGAACTTGCTGCAGTGCGTCGTTGGATTGAGGTTATGCGACGGCAGCAGCAACAACATCAAAACTTGCATGCAAATCAACAACATGCTCCTCCACATGCTGGTGAAAATGATGATCAGTGA 423 0.4326 MNLQPPRRKACPACKYQRRRCSPDCIFALHFPDDPVVYADIDKLFGRATAERLFQRAEPELQEDLVKSICWEARMWRRQSPFIGCLGYMNWLEEQITKTSIELAAVRRWIEVMRRQQQQHQNLHANQQHAPPHAGENDDQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3103 140 MobiDBLite consensus disorder prediction 118 140 - -
Dod02g3103 140 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Dod02g3103 140 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 129 - -
Dod02g3103 140 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 129 - -
Dod02g3103 140 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3103 Dod-Chr2 65831802 65832592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3103 9 122 AS2 family AT3G26660 37.391 6.03e-23 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod02g3103 LOB 4.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3103 - K14486 ppp:112273355 90.5077