Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3074 ATGGTTTTCCCATTTTTGAGTTACCTCCTCATTCTCCTTCCATTTCCAATTTCAAATAAAGATTCTTCTACCTTGTCTTTATCCACTCAAAGGGAAATGGAGGGCCATGGTGAAATGGGTGTTATTGGAGAACATTTTGATAATGGTTTGATTGGGAGAATGAGGGATGAGGAGTATGAAAGCCGGTCGGGGAGTGACAATTTCGAAGGTGCATCTGGTGATGATCAAGATGCTGCCGATGATCAGCCACAGCAGCGGAAGAAGAAATACCATAGACACACTCCTTACCAAATTCAGGAGCTTGAGGCTTTCTTCAAGGAGTGTGCTCATCCTGATGAGAAGCAAAGAGCAGACCTTAGTAGGAGGCTTAACTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAATCGCCGAACCCAAGTGAAGACCCAACTAGAACGCCATGAGAACTCGATTCTTAAGCAGGAAAACGACAGGCTCCGAGCTGAGAACGGCGCCATGAAGGAAGCTATGGCAAACCCAATATGTAACAACTGTGGTGGCCCCGCCATTCCCGGCCAAATTTCATTCGATGAACACCAGATTAGAATTGAAAATGCTCGATTGAAGGATGAATTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTGGGCAGGCCACTCTCGTCATTGGCCAGTCCCATGGCTCTGCCAACCCCAAATTCTGGTCTAGAGCTTGGTATTGGAAGGAATGGGATTAGTGGTTCAAGCAATCTTGGCATGTCCTTGCCAATGGGACTTGATTTGGGGGATGGAGTTTTGGGCACCCCCCCTGCCATGGCGGGGATTAGATCTCCGATGGGATTGATGGCAAATGATGTCCAGTTTGAGAGGCGTATGCTTATAGATCTTGCATTGATGGCTATGGATGAGTTGATTAAGATGGCTCAAGCGGATGGCCCACTTTGGATTAAGAGTTCGGATGGCGAGAAGGAAATTCTGAACCATGAGGAGTATGCAAGGATGGGTTCTCCATTTATTTGTCCAACAGCTCCAGGTTATGTAACTGAAGCTACAAGAGAATCCGGAGTAGTAATAATTAACAGTTCAGCCCTCGCTGAAACATTGATGGACCCGGATCGATGGTCGGAGATGTTTCCTTCTATTATTTCTAGAGCTGCCACCCTGGATGTTATAACTAGTGGCATGGGTGGAACTCTAAACGGAGCTTTGCAAGTGGTATGTTCCTCTGCAGTATGTTTGCTTCACTTTGCTGTGTTTGGCTGGAACTGA 1272 0.4623 MVFPFLSYLLILLPFPISNKDSSTLSLSTQREMEGHGEMGVIGEHFDNGLIGRMRDEEYESRSGSDNFEGASGDDQDAADDQPQQRKKKYHRHTPYQIQELEAFFKECAHPDEKQRADLSRRLNLENKQVKFWFQNRRTQVKTQLERHENSILKQENDRLRAENGAMKEAMANPICNNCGGPAIPGQISFDEHQIRIENARLKDELNRICALANKFLGRPLSSLASPMALPTPNSGLELGIGRNGISGSSNLGMSLPMGLDLGDGVLGTPPAMAGIRSPMGLMANDVQFERRMLIDLALMAMDELIKMAQADGPLWIKSSDGEKEILNHEEYARMGSPFICPTAPGYVTEATRESGVVIINSSALAETLMDPDRWSEMFPSIISRAATLDVITSGMGGTLNGALQVVCSSAVCLLHFAVFGWN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3074 423 Coils Coil 138 173 - -
Dod02g3074 423 Gene3D - 73 161 - -
Dod02g3074 423 Pfam START domain 297 406 IPR002913 GO:0008289
Dod02g3074 423 MobiDBLite consensus disorder prediction 58 93 - -
Dod02g3074 423 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 29 410 - -
Dod02g3074 423 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 29 410 IPR042160 -
Dod02g3074 423 SUPERFAMILY Bet v1-like 289 395 - -
Dod02g3074 423 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Dod02g3074 423 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Dod02g3074 423 ProSiteProfiles START domain profile. 287 395 IPR002913 GO:0008289
Dod02g3074 423 SMART HOX_1 86 148 IPR001356 GO:0003677
Dod02g3074 423 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Dod02g3074 423 CDD homeodomain 87 144 IPR001356 GO:0003677
Dod02g3074 423 SUPERFAMILY Homeodomain-like 70 144 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3074 Dod-Chr2 64961272 64963145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3074 46 407 Homeobox Transcription Factor Family AT4G00730 56.354 3.38e-133 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod02g3074 START 3.8e-09 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3074 K09338 - gmx:100785102 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3074 02 64961272 64963145 Dod06g0750 06 9165449 9172484 ECH
Dod02g3074 02 64961272 64963145 Dod02g3074 02 64961272 64963145 ECH