Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3067 ATGACCACCACCACCACCATAATCATCATCAATTTCCTCGAACACTGCCACGTCATCACCACCTTCTTCCTCTTATCATCATTCTCCATGTTCCAAAACACCGTTGCTCAAGCGGCTGCACCAGTGGCACCAGCGGCTCCAGGAACACTGAACGATAACGCGAACCCCTCCCTCGCGATTCTCCTGATGATGCTCATCTTCGCCTTCTTCATCACTGGTTTCTGCTCTATCTACATTCGCCACTGCTCCGAACACTACGTGGTTTCCGGCACCGCCATTGGTCCACGTGGCATCGACCCAGAGGTTCTCTCCACGTTCCCAGTCATGGTGTATTCCACCGTCAAGCACCTCAAAACGGGTCACAGCGTTGCGCTTCAGTGTGCTGTGTGCTTGAACGAGTTCAAGGACTTGGACGCGCTGAAATTGCTTCCGAAATGCAGTCACGTGTTCCACCCGGATTGCATCGACGCGTGGCTCGCCTCTCATGTGACCTGCCCCGTTTGTAGGGCGAAGCTGAAGCCGGAAAAGGTCGAATTCAAGGTGGAAATTGGAGAGGGAAGTGGTGAAAGCCAAGTGTTCGACGAAATTTCTGAGAGAAGAGGTGAAATTTTTGGTGAGGGGAATGAAGTTGGGGTTGGTGGGGGAGTTGATGGGGTTGTTGGGAAGGATCATGGGTCGTCAAAGGTGATAGCTTTTGCGGTTTTGCCGAGGTCGCATTCTACGGGTCATTCTCTGGTTGAACCGGGGAAGAGCTTAGAGAGGTTTACTTTGAGGTTGCCTGAGGAAGTGAGGAACCAGATTCTTGATGGGAATAGTAATAAGTGTGGTGGGAAGATGAAGCGTTCTGCCAGCTACGACGTCGTTTGGCAGAGCGGTGAAGGTTGTAGTGGCGGTGGTGAAGGTGGTGGTAGTAGTAAGGGGAAGAATAATAACAAGTGGGTGCTGTCGATGACCCCTCCCTTTGTTTCTCGGGGTTGGGGTTCTTCTTCTTCTTCTTCGGGTGTGGCACCGAATGAATGCACTACTTGTTCTGGGATTCCGAAGTTTTGGGCTTCTTCTATCTCTATTGCAAGTGGGAGAGCGGGTTTGCAAGTCGTATGA 1101 0.5159 MTTTTTIIIINFLEHCHVITTFFLLSSFSMFQNTVAQAAAPVAPAAPGTLNDNANPSLAILLMMLIFAFFITGFCSIYIRHCSEHYVVSGTAIGPRGIDPEVLSTFPVMVYSTVKHLKTGHSVALQCAVCLNEFKDLDALKLLPKCSHVFHPDCIDAWLASHVTCPVCRAKLKPEKVEFKVEIGEGSGESQVFDEISERRGEIFGEGNEVGVGGGVDGVVGKDHGSSKVIAFAVLPRSHSTGHSLVEPGKSLERFTLRLPEEVRNQILDGNSNKCGGKMKRSASYDVVWQSGEGCSGGGEGGGSSKGKNNNKWVLSMTPPFVSRGWGSSSSSSGVAPNECTTCSGIPKFWASSISIASGRAGLQVV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3067 366 Pfam Ring finger domain 126 169 IPR001841 -
Dod02g3067 366 PANTHER RING FINGER DOMAIN-CONTAINING 18 301 - -
Dod02g3067 366 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 18 301 - -
Dod02g3067 366 CDD RING-H2_PA-TM-RING 126 169 - -
Dod02g3067 366 SMART ring_2 127 168 IPR001841 -
Dod02g3067 366 SUPERFAMILY RING/U-box 113 175 - -
Dod02g3067 366 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Dod02g3067 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 175 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3067 Dod-Chr2 64893417 64894517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3067 30 324 Rapid Response to Elicitors AT3G05200 36.335 2.08e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3067 K10664 - fve:101295180 227.254