Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3065 ATGGCTCAACTTCATCTTAAACACTTCACATGGTTTCACCTTCACCTAATCATTATTCTCTTCCTACTCCTCCTCCTCCATGGTGGTGTTGATGCACAATCATCATCCACGCAACCAGTTCCAACATACCTCTCCCACCACAACTGGGAACCTTCCTTTGCAATCACAGTAGGTGCCATCATATGTGCTCTCCTCTTCATGGGGATCATCACAATCTGCATCCGAAAATGTGCTGAATCACACATCATCACAAACAACCAAACCAATAACCACCCAAGAACAACATCAGAATGTTCATGTTCTTGCTCACAAGGCATCACCAAGGAACTCCTCAACACCTTCCCAATCCTCTTCTACCCCACCATCAAGGACCTCAAGATAGGAAAAGGGTCATTGGAATGTGCAGTTTGCTTAACCGATTTCAAGGACTACGACACACTAAGGTTGCTACCAAAGTGCAACCACGTGTTCCACCCTCAATGCATAGACTCGTGGCTATGTTCCCACGTGACATGCCCCGTTTGTCGCGCGAATCTGAACCAAGATTCATGCGAAGTTGCAGTAACCGTGCCGCCAACCCAATTGAACACTCCCCAAAGGGTTGATGAAAGCTCAGGAACAGAAGCTGAACACAATAACGGTGGTGGTGGTGGTGAAGAGAACGAGGTGGAGCAAAACCAGGTCGTGGAAAACGAGGATCAGGGCAAAATTGATGACGGGGTTGCTCCAAAATCGAAGCTTCTGAGGTCAAACTCAACTGGGCACTCTCTGGTGGAACAAGGGAAGAGTGAGGAGAGGTTCATGCTGAGGTTGCCGGAAGATGTAAGGAGGTACATTATAGTGAACCAAGGTGTAAGGGTGCACCGTTCCGCCAGCTACAACAACAACAATATGGTGAGAGGGGTTTGTTGGAGTGACAGTGAAGGAGGAAGCAGCAAAGGGAAGAACTTGTGGATGCTTTGGAGCCGTGGTTAG 975 0.481 MAQLHLKHFTWFHLHLIIILFLLLLLHGGVDAQSSSTQPVPTYLSHHNWEPSFAITVGAIICALLFMGIITICIRKCAESHIITNNQTNNHPRTTSECSCSCSQGITKELLNTFPILFYPTIKDLKIGKGSLECAVCLTDFKDYDTLRLLPKCNHVFHPQCIDSWLCSHVTCPVCRANLNQDSCEVAVTVPPTQLNTPQRVDESSGTEAEHNNGGGGGEENEVEQNQVVENEDQGKIDDGVAPKSKLLRSNSTGHSLVEQGKSEERFMLRLPEDVRRYIIVNQGVRVHRSASYNNNNMVRGVCWSDSEGGSSKGKNLWMLWSRG* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3065 324 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Dod02g3065 324 CDD RING-H2_EL5_like 133 176 - -
Dod02g3065 324 MobiDBLite consensus disorder prediction 195 259 - -
Dod02g3065 324 MobiDBLite consensus disorder prediction 195 211 - -
Dod02g3065 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 183 IPR013083 -
Dod02g3065 324 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 220 297 - -
Dod02g3065 324 PANTHER RING FINGER DOMAIN-CONTAINING 220 297 - -
Dod02g3065 324 PANTHER RING FINGER DOMAIN-CONTAINING 5 203 - -
Dod02g3065 324 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 203 - -
Dod02g3065 324 SUPERFAMILY RING/U-box 133 182 - -
Dod02g3065 324 SMART ring_2 134 175 IPR001841 -
Dod02g3065 324 MobiDBLite consensus disorder prediction 229 243 - -
Dod02g3065 324 Pfam Ring finger domain 133 176 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3065 Dod-Chr2 64878116 64879573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3065 16 280 Rapid Response to Elicitors AT3G05200 36.364 1.84e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3065 K10664 - gmx:100782532 293.123